RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 NDUFA2O43678 99 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 HPXP02790 462 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PPIAL4FP0DN26 164 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 DUSP1P28562 367 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PRDX2P32119 198 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 RCVRNP35243 200 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PLA1AQ53H76 456 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PAN3Q58A45 887 aaKnown RBP11.5□□□□□ -0.57
VAPB-202ENST00000395802 SPRNQ5BIV9 151 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 Q6P435 159 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 GLCCI1Q86VQ1 547 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 SUMF2Q8NBJ7 301 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 C12orf4Q9NQ89 552 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 IL36RNQ9UBH0 155 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 KCNK7Q9Y2U2 307 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PPIAL4AQ9Y536 164 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 LGALS8O00214 317 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 PSG2P11465 335 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 DTYMKP23919 212 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 TAS2R19P59542 299 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 ZNF561Q8N587 486 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 CCL19Q99731 98 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 SULT4A1Q9BR01 284 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 ELF5Q9UKW6 265 aaPredicted RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 MGAT4AQ9UM21 535 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 CACNA1DQ01668 2161 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 TRAV24A0A0B4J272 114 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 NAP1L6A6NFF2 107 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 SIRPB1O00241 398 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 SLC33A1O00400 549 aaPredicted RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 PFDN1O60925 122 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 EGR1P18146 543 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 TBPP20226 339 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 SSTR2P30874 369 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 GABRA2P47869 451 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 SFRP4Q6FHJ7 346 aaPredicted RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 NUDCD2Q8WVJ2 157 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 UPRTQ96BW1 309 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 CHMP1AQ9HD42 196 aaPredicted RBP11.49□□□□□ -0.57
VAPB-202ENST00000395802 ETAA1Q9NY74 926 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 AK3Q9UIJ7 227 aa11.49□□□□□ -0.57
VAPB-202ENST00000395802 DYSFO75923 2080 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 UBE2QL1A1L167 161 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.48□□□□□ -0.57
VAPB-202ENST00000395802 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
VAPB-202ENST00000395802 DAOP14920 347 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 EFNA4P52798 201 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 PDCD1Q15116 288 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 SRSF7Q16629 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
VAPB-202ENST00000395802 ACTBL2Q562R1 376 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 OLFML2AQ68BL7 652 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 PLET1Q6UQ28 207 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 SLC36A1Q7Z2H8 476 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 MUC20Q8N307 709 aaPredicted RBP11.48□□□□□ -0.57
VAPB-202ENST00000395802 ANGPTL6Q8NI99 470 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 MED30Q96HR3 178 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 SNX22Q96L94 193 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 FAM234AQ9H0X4 552 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 ZNF665Q9H7R5 613 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 HRASLSQ9HDD0 168 aa11.48□□□□□ -0.57
VAPB-202ENST00000395802 ZNF701Q9NV72 531 aaPredicted RBP11.48□□□□□ -0.57
VAPB-202ENST00000395802 MEIS3P1A6NDR6 274 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 ZNF736B4DX44 427 aaPredicted RBP11.47□□□□□ -0.57
VAPB-202ENST00000395802 OVOL3O00110 214 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 MT-ND4P03905 459 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 CSN2P05814 226 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 TMEM33P57088 247 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 COL10A1Q03692 680 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 ATPAF1Q5TC12 328 aaPredicted RBP11.47□□□□□ -0.57
VAPB-202ENST00000395802 STUMQ69YW2 141 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 HOGA1Q86XE5 327 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 ASCC1Q8N9N2 400 aaKnown RBP11.47□□□□□ -0.57
VAPB-202ENST00000395802 TMEM229BQ8NBD8 167 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 RAB1CQ92928 201 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 SDSLQ96GA7 329 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 MARVELD1Q9BSK0 173 aa11.47□□□□□ -0.57
VAPB-202ENST00000395802 IGKV1D-17A0A075B6S4 117 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 A0A0B4J293 547 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 HSPB6O14558 160 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 AKAIN1P0CW23 69 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 CD80P33681 288 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 TAS2R46P59540 309 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 BTG1P62324 171 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 PAX5Q02548 391 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 MEF2DQ14814 521 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 BRICD5Q6PL45 260 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 MOB1BQ7L9L4 216 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 BPIFB2Q8N4F0 458 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 CREB3L1Q96BA8 519 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms