RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 DYSFO75923 2080 aa15.63■□□□□ 0.09
CLN3-206ENST00000360019 IGKV1D-8A0A087WSZ0 117 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 NAP1L6A6NFF2 107 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 M0QYG6 137 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 CD8AP01732 235 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 SOD3P08294 240 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 FCGR3AP08637 254 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 GIFP27352 417 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 MRPS15P82914 257 aaKnown RBP15.62■□□□□ 0.09
CLN3-206ENST00000360019 OR11L1Q8NGX0 322 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 NEK7Q8TDX7 302 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 CBLN4Q9NTU7 201 aa15.62■□□□□ 0.09
CLN3-206ENST00000360019 IGHV3OR15-7A0A075B7D8 119 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 RAB3DO95716 219 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 HPXP02790 462 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 GLAP06280 429 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 PSG2P11465 335 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 DTYMKP23919 212 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 LMO1P25800 156 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 CD80P33681 288 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 HRH1P35367 487 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 FAUP35544 74 aaKnown RBP15.61■□□□□ 0.09
CLN3-206ENST00000360019 FAM90A1Q86YD7 464 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 BEST4Q8NFU0 473 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 OR56B4Q8NH76 319 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 DNAJB11Q9UBS4 358 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 METRNQ9UJH8 293 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 WIPI2Q9Y4P8 454 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 hCG_2014768A0A024R1R8 64 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 IGKV1D-17A0A075B6S4 117 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 PSPNO60542 156 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 NAPSAO96009 420 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 PPOXP50336 477 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 MICBQ29980 383 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 PAN3Q58A45 887 aaKnown RBP15.61■□□□□ 0.09
CLN3-206ENST00000360019 AGAP6Q5VW22 663 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 CD177Q8N6Q3 437 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 UPRTQ96BW1 309 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 CACNG6Q9BXT2 260 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 DPAGT1Q9H3H5 408 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 FAIMQ9NVQ4 179 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 ETAA1Q9NY74 926 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 GLS2Q9UI32 602 aa15.61■□□□□ 0.09
CLN3-206ENST00000360019 OR2AT4A6NND4 320 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 ZNF205O95201 554 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 ZNF735P0CB33 412 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 AMY2BP19961 511 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 RBM39Q14498 530 aaKnown RBP15.6■□□□□ 0.09
CLN3-206ENST00000360019 DTX2Q86UW9 622 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 OR4K15Q8NH41 348 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 VRK1Q99986 396 aaPredicted RBP15.6■□□□□ 0.09
CLN3-206ENST00000360019 SPOCK3Q9BQ16 436 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 CHST6Q9GZX3 395 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 PPA2Q9H2U2 334 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 CRYBG3Q68DQ2 2970 aa15.6■□□□□ 0.09
CLN3-206ENST00000360019 IFNL4K9M1U5 179 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 PMP2P02689 132 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 IRF2P14316 349 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 PRDX2P32119 198 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 COL10A1Q03692 680 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 RNASE10Q5GAN6 216 aaKnown RBP15.59■□□□□ 0.09
CLN3-206ENST00000360019 PLET1Q6UQ28 207 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 OR51S1Q8NGJ8 323 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 PLPPR1Q8TBJ4 325 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 HPS1Q92902 700 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 ZNF222Q9UK12 451 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 TENM4Q6N022 2769 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 TMEM82A0PJX8 343 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 LRRC30A6NM36 301 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 TCRBP04435 133 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 CSN2P05814 226 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 TBPP20226 339 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 SHEQ5VZ18 495 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 C20orf204Q6ZNR8 217 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 ANGPTL6Q8NI99 470 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 CCL17Q92583 94 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 SLC6A7Q99884 636 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 TRAF4Q9BUZ4 470 aaPredicted RBP15.59■□□□□ 0.09
CLN3-206ENST00000360019 UBTD1Q9HAC8 227 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 TMEM165Q9HC07 324 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 CHMP1AQ9HD42 196 aaPredicted RBP15.59■□□□□ 0.09
CLN3-206ENST00000360019 TMEM106BQ9NUM4 274 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 EDARQ9UNE0 448 aa15.59■□□□□ 0.09
CLN3-206ENST00000360019 RAI1Q7Z5J4 1906 aaPredicted RBP15.58■□□□□ 0.08
CLN3-206ENST00000360019 TMEM178BH3BS89 294 aa15.58■□□□□ 0.08
CLN3-206ENST00000360019 AMY2AP04746 511 aa15.58■□□□□ 0.08
CLN3-206ENST00000360019 MEF2DQ14814 521 aa15.58■□□□□ 0.08
CLN3-206ENST00000360019 ATXN7L3Q14CW9 347 aaPredicted RBP15.58■□□□□ 0.08
CLN3-206ENST00000360019 TEX36Q5VZQ5 186 aa15.58■□□□□ 0.08
CLN3-206ENST00000360019 ZNF782Q6ZMW2 699 aaPredicted RBP15.58■□□□□ 0.08
CLN3-206ENST00000360019 C17orf107Q6ZR85 190 aa15.58■□□□□ 0.08
CLN3-206ENST00000360019 MRPL30Q8TCC3 161 aaKnown RBP15.58■□□□□ 0.08
CLN3-206ENST00000360019 SEBOXQ9HB31 216 aaPredicted RBP15.58■□□□□ 0.08
CLN3-206ENST00000360019 LAMP3Q9UQV4 416 aa15.58■□□□□ 0.08
CLN3-206ENST00000360019 TANC2Q9HCD6 1990 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 CLEC18AA5D8T8 446 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 GOSR1O95249 250 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 CLDN1O95832 211 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 OR3A1P47881 315 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 VAX1Q5SQQ9 334 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms