RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IL4I1Q96RQ9 567 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 MYCBPQ99417 103 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 PSPNO60542 156 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 OR2F2O95006 317 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 PF4P02776 101 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 ISG15P05161 165 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 CD34P28906 385 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 MNDAP41218 407 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 KPNB1Q14974 876 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 ATP6AP1Q15904 470 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 CHST4Q8NCG5 386 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 TRUB1Q8WWH5 349 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 RBM14Q96PK6 669 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 OSBPL10Q9BXB5 764 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 HMG20AQ9NP66 347 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 PCDHB16Q9NRJ7 776 aa14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 ZMAT5Q9UDW3 170 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-227ENST00000602011 TOR1AO14656 332 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 ENTPD6O75354 484 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 IGLV1-47P01700 117 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 IGHA1P01876 353 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 FCGR1AP12314 374 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 ATF1P18846 271 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 FASP25445 335 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 PDZK1IP1Q13113 114 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 ODF4Q2M2E3 257 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 VAX1Q5SQQ9 334 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 Q6ZS46 218 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 SSX6Q7RTT6 188 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 OR10H4Q8NGA5 316 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 CHST6Q9GZX3 395 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 GABARAPL1Q9H0R8 117 aa14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 EXOSC4Q9NPD3 245 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-227ENST00000602011 MT-ND2P03891 347 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 CSN2P05814 226 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 OCM2P0CE71 109 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 OCMP0CE72 109 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 FAM106CPP0CH98 169 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 IGLL1P15814 213 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 PRKACAP17612 351 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 EPHA2P29317 976 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 SLC6A1P30531 599 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 OR3A1P47881 315 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 DCTN2Q13561 401 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 C11orf87Q6NUJ2 197 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 THNSL2Q86YJ6 484 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 SAXO1Q8IYX7 474 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 TPRX1Q8N7U7 411 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 OR4D6Q8NGJ1 314 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 TBX5Q99593 518 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 SLC25A33Q9BSK2 321 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 RBFOX1Q9NWB1 397 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 HHLA2Q9UM44 414 aa14.24□□□□□ -0.13
SHKBP1-227ENST00000602011 DNAH9Q9NYC9 4486 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 A0A087X0M5 115 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 LOC107986453A0A1B0GWG9 222 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 A0A1B0GX30 115 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 MITFO75030 526 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 MPIG6BO95866 241 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 VSIG8P0DPA2 414 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 ZNF20P17024 532 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 BCL3P20749 454 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 CDK2P24941 298 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 NPBWR2P48146 333 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 CCR9P51686 369 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 ISL1P61371 349 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 FDX2Q6P4F2 183 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 PRSS35Q8N3Z0 413 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 SLC7A6OSQ96CW6 309 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 OPALINQ96PE5 141 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 MBOAT4Q96T53 435 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 COMMD4Q9H0A8 199 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 NCOR1P1Q9H4R4 102 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 OR6C3Q9NZP0 311 aa14.23□□□□□ -0.13
SHKBP1-227ENST00000602011 MEX3AA1L020 520 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 BUB1B-PAK6H3BSN5 160 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 KDM4BO94953 1096 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 INMTO95050 263 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 OR2H2O95918 312 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 DUSP1P28562 367 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 POU3F4P49335 361 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 ABCA11PQ4W5N1 156 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 ZNF565Q8N9K5 539 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 OR51D1Q8NGF3 324 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 OR2G2Q8NGZ5 317 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 DPF1Q92782 380 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 MYDGFQ969H8 173 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 FGGYQ96C11 551 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 MRPL48Q96GC5 212 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 MCRIP2Q9BUT9 160 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 GNG8Q9UK08 70 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 GSTK1Q9Y2Q3 226 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 AP4S1Q9Y587 144 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 COL7A1Q02388 2944 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 DSCAML1Q8TD84 2053 aa14.22□□□□□ -0.13
SHKBP1-227ENST00000602011 IGKV1-9A0A0C4DH69 117 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 A0A1W2PRX2 142 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 SNTNA6NMZ2 147 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 ZNF729A6NN14 1252 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms