RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TSPOP30536 169 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 GPM6AP51674 278 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 GNG3P63215 75 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 PLEKHS1Q5SXH7 462 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TXNDC8Q6A555 127 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 MRPL54Q6P161 138 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 UHRF2Q96PU4 802 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CDC42EP3Q9UKI2 254 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 HEBP2Q9Y5Z4 205 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 NUP205Q92621 2012 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 A0A0U1RQF3 1178 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 HMGN2P05204 90 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 SRFP11831 508 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 MAS1LP35410 378 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TDRG1Q3Y452 100 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 MSRB3Q8IXL7 192 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CD99L2Q8TCZ2 262 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 OR5P2Q8WZ92 322 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TMEM106CQ9BVX2 250 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 KLRF1Q9NZS2 232 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 WNK3Q9BYP7 1800 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 FRMPD1Q5SYB0 1578 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 MT-CO3P00414 261 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CFIP05156 583 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 ISG15P05161 165 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 SUMO3P55854 103 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 SRPXP78539 464 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CCDC144NLQ6NUI1 221 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 BHLHA15Q7RTS1 189 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 MARCH3Q86UD3 253 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 OR5D13Q8NGL4 314 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CLDN23Q96B33 292 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TMEM38BQ9NVV0 291 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 ICAM5Q9UMF0 924 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 PSME4Q14997 1843 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 C17orf102A2RUQ5 167 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 CBLN1P23435 193 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF93P35789 620 aaPredicted RBP7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 GPR12P47775 334 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 TMEM191AQ9H0A3 160 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 BARX1Q9HBU1 254 aaPredicted RBP7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 CUTCQ9NTM9 273 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 P2RY10O00398 339 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 OR5AL1P0C617 328 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 ADAMTSL5Q6ZMM2 481 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 BIVMQ86UB2 503 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 BAHD1Q8TBE0 780 aaPredicted RBP7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF480Q8WV37 535 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 C11orf40Q8WZ69 217 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 PTX4Q96A99 478 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 MRPL18Q9H0U6 180 aaKnown RBP7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 ZDHHC3Q9NYG2 299 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 SLC5A6Q9Y289 635 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 DENND4AQ7Z401 1863 aa7.96□□□□□ -1.13
GTF2A1-203ENST00000553612 FAM157BP0CG42 384 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 CYB561P49447 251 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 LINC00346Q8IVM7 164 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 OR2T6Q8NHC8 308 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 ANKRD9Q96BM1 317 aaPredicted RBP7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 RNF183Q96D59 192 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 GPR35Q9HC97 309 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 MRPL16Q9NX20 251 aaKnown RBP7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 VSIG4Q9Y279 399 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 F2RP25116 425 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 CCR5P51681 352 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 PHYKPLQ8IUZ5 450 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 FGF20Q9NP95 211 aaPredicted RBP7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 IGHV2OR16-5A0A0B4J2B6 119 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 LOC107984156A0A0G2JMH3 177 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 FAM231BA6NCW3 169 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 ALG1L2C9J202 215 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 CSN3P07498 182 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 ZBTB25P24278 435 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 SBSNQ6UWP8 590 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 STAC2Q6ZMT1 411 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 ARL17AQ8IVW1 177 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 OR10X1Q8NGY0 326 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 SGMS2Q8NHU3 365 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 POPDC3Q9HBV1 291 aa7.96□□□□□ -1.14
GTF2A1-203ENST00000553612 CDC14CA4D256 554 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 GCSAMLQ5JQS6 135 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 TCEAL8Q8IYN2 117 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 OR1K1Q8NGR3 316 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 MAFAQ8NHW3 353 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 A0A087X0K7 114 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 EFEMP2O95967 443 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 MT-ND6P03923 174 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 XKR7Q5GH72 579 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 TMEM225Q6GV28 225 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 SLCO4C1Q6ZQN7 724 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 UBL7Q96S82 380 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 TWSG1Q9GZX9 223 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 SMG9Q9H0W8 520 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
GTF2A1-203ENST00000553612 LRP12Q9Y561 859 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms