RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CA14Q9ULX7 337 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 ADAM20O43506 726 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 EFNA2O43921 213 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 AADACP22760 399 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 RPS18P62269 152 aaKnown RBP12.77□□□□□ -0.36
COL6A2-201ENST00000300527 HLA-DRB3P79483 266 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 TMEM240Q5SV17 173 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 TPSD1Q9BZJ3 242 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 MOB1AQ9H8S9 216 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 B3GAT1Q9P2W7 334 aa12.77□□□□□ -0.36
COL6A2-201ENST00000300527 A0A1W2PQD3 144 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
COL6A2-201ENST00000300527 TAS2R60P59551 318 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 C17orf67Q0P5P2 114 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 FBXL14Q8N1E6 418 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 BOD1Q96IK1 185 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 ARV1Q9H2C2 271 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 ALKBH4Q9NXW9 302 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 MMACHCQ9Y4U1 282 aa12.77□□□□□ -0.37
COL6A2-201ENST00000300527 OR7C1O76099 320 aaPredicted RBP12.76□□□□□ -0.37
COL6A2-201ENST00000300527 RNF4P78317 190 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 IL13RA2Q14627 380 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 ADIRFQ15847 76 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 IZUMO4Q1ZYL8 232 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 KDF1Q8NAX2 398 aaPredicted RBP12.76□□□□□ -0.37
COL6A2-201ENST00000300527 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 PATE4P0C8F1 98 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 GABRG2P18507 467 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF665Q9H7R5 613 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 GLRX2Q9NS18 164 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 MSTNO14793 375 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 NR2C1P13056 603 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
COL6A2-201ENST00000300527 TMEM267Q0VDI3 215 aaPredicted RBP12.76□□□□□ -0.37
COL6A2-201ENST00000300527 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 OBP2AQ9NY56 170 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 PIAS3Q9Y6X2 628 aa12.76□□□□□ -0.37
COL6A2-201ENST00000300527 CEBPZOSA8MTT3 80 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 PGA3P0DJD8 388 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 GLIPR1P48060 266 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 OR1D5P58170 312 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 OR1L3Q8NH93 324 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 SLC25A31Q9H0C2 315 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 KIAA1456Q9P272 454 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 BRWD1Q9NSI6 2320 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 ANKUB1A6NFN9 424 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 G3V3Y1 287 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 IGHV4-34P06331 123 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 PLA2G5P39877 138 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 ERVS71-1P61550 626 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 P4HTMQ9NXG6 502 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 LAMP3Q9UQV4 416 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 IDH3GP51553 393 aaPredicted RBP12.75□□□□□ -0.37
COL6A2-201ENST00000300527 SNAI3Q3KNW1 292 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 BCO1Q9HAY6 547 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 RALGAPA1Q6GYQ0 2036 aa12.75□□□□□ -0.37
COL6A2-201ENST00000300527 SPTBN5Q9NRC6 3674 aaKnown RBP12.74□□□□□ -0.37
COL6A2-201ENST00000300527 NCOA6Q14686 2063 aaPredicted RBP12.74□□□□□ -0.37
COL6A2-201ENST00000300527 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 DHRS3O75911 302 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 LCATP04180 440 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ECI1P42126 302 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
COL6A2-201ENST00000300527 UCP2P55851 309 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ZP4Q12836 540 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 TMEM37Q8WXS4 190 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 MSI2Q96DH6 328 aaKnown RBP12.74□□□□□ -0.37
COL6A2-201ENST00000300527 BORCS8Q96FH0 119 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 CALHM2Q9HA72 323 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 FBRSQ9HAH7 460 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 PCDH15Q96QU1 1955 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 M0R135 149 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 BLKP51451 505 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ST8SIA1Q92185 356 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 MVB12AQ96EY5 273 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF799Q96GE5 643 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 GPR87Q9BY21 358 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 MRPL13Q9BYD1 178 aaKnown RBP12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF286AQ9HBT8 521 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 IFNL4K9M1U5 179 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 CD55P08174 381 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ARL6IP1Q15041 203 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 MYPOPQ86VE0 399 aaPredicted RBP12.74□□□□□ -0.37
COL6A2-201ENST00000300527 PLEKHF2Q9H8W4 249 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 ST3GAL6Q9Y274 331 aa12.74□□□□□ -0.37
COL6A2-201ENST00000300527 FAM186AA6NE01 2351 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 IGKV3D-11A0A0A0MRZ8 115 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 CLDN34H7C241 214 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 TRAF3IP2O43734 574 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-201ENST00000300527 CHST1O43916 411 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-201ENST00000300527 GRB2P62993 217 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms