RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 ElobP62869 118 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Fthl17dQ3SXD1 176 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Irgm1Q60766 409 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr5Q60889 312 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 1810024B03RikQ8BWE1 200 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm13199Q8C8E0 125 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Angptl8Q8R1L8 198 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lrrc26Q91W20 331 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Eva1aQ91WM6 156 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Steap4Q923B6 470 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Fthl17Q99MX2 176 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ankrd29D3YVV3 309 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gprin2D3Z1D7 455 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr424E9Q0Q2 315 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr370E9Q848 314 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm2035J3QP87 144 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm20939L7N243 523 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gp6P0C191 313 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Drd3P30728 446 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rab18P35293 206 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gabrr1P56475 480 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ext1P97464 746 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Q3TTL0 348 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 SelenohQ3UQA7 116 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Taf9bQ6NZA9 249 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lrfn4Q80XU8 636 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rtp2Q80ZI2 223 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Sh2d7Q8BI17 458 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dhrs7cQ8CHS7 311 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r28Q8R2C9 302 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr559Q8VH14 318 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmem205Q91XE8 189 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Arrdc1Q99KN1 434 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ogfod3Q9D136 315 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Adh4Q9QYY9 377 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 ChrdQ9Z0E2 948 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Piezo2Q8CD54 2822 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Trav10nA0A075B622 114 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Trav10A0A075B642 114 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rsu1Q01730 277 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ceacam12Q3UKP4 300 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Foxr2Q3UM89 302 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmem211Q3UUA0 195 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Wdr48Q8BH57 676 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tm2d3Q8BJ83 261 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ip6k3Q8BWD2 396 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Zfp286Q8C0E6 519 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tsen54Q8C2A2 525 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmem150cQ8C8S3 249 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r19Q8R2C7 308 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cavin3Q91VJ2 260 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dnajc24Q91ZF0 196 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Pofut1Q91ZW2 393 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ndufa6Q9CQZ5 131 aaKnown RBP11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Znf593Q9DB42 134 aaKnown RBP11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr934Q9EQ87 310 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Sec61a2Q9JLR1 476 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ggta1l1A2AUQ7 319 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Prrt2E9PUL5 346 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Macc1E9PXX8 851 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm9125P0DMR6 365 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cyb5aP56395 134 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Nkain2Q4PNJ2 208 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rnf150Q5DTZ6 437 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr323Q5NCD0 323 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gpr135Q7TQP2 457 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Adprhl1Q8BGK2 353 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Hs3st3a1Q8BKN6 393 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Klhl24Q8BRG6 600 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rdh16f2Q8K3M1 318 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 D1Ertd622eQ8VEB3 207 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1309Q8VF83 320 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr341Q8VGK9 313 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cldnd1Q9CQX5 253 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 9330161L09RikQ9D253 136 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 OxsmQ9D404 459 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 GlceQ9EPS3 618 aa11.88□□□□□ -0.51
Nup88-201ENSMUST00000035283 Zfp456B2RUK9 458 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Spink14B9EJP9 96 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 FaimlJ3QPY3 178 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Pias3O54714 628 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tgfbr3O88393 850 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cbr2P08074 244 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 PlatP11214 559 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rps2P25444 293 aaKnown RBP11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lbx1P52955 282 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Defb4P82019 63 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr714Q7TRN0 317 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r235Q8R297 328 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rpusd1Q8VCZ8 306 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Brinp1Q920P3 760 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 4933400A11RikQ9CR52 288 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 GltpQ9JL62 209 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm4131A0A140LJ24 318 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm45716A0A1B0GRQ0 93 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm17655A0A1B0GT13 591 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Itga5P11688 1053 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 FgrP14234 517 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cd40P27512 289 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cbr1P48758 277 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 143 ms