RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FAM24AA6NFZ4 105 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 IGKV1D-12P01611 117 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 NCMAPQ5T1S8 102 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 TMEM123Q8N131 208 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 LGI3Q8N145 548 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 SLC35G3Q8N808 338 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 SLAMF9Q96A28 289 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 RARRES3Q9UL19 164 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 HSF4Q9ULV5 492 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 ADAMTS20P59510 1910 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 CLN5O75503 358 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 IGHV2-5P01817 119 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 DTYMKP23919 212 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 HIST1H3AP68431 136 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 CCL20P78556 96 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 HIST2H3PS2Q5TEC6 136 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 HIST2H3AQ71DI3 136 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 AKR7LQ8NHP1 331 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 TP53RKQ96S44 253 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 PBDC1Q9BVG4 233 aa15.15■□□□□ 0.02
SCARF1-205ENST00000571272 CDRT15L2A8MXV6 281 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 GDF9O60383 454 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 DKK1O94907 266 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 RBP2P50120 134 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 SUCLG1P53597 346 aaKnown RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 FAM209BQ5JX69 171 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 C5orf24Q7Z6I8 188 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 SPSB1Q96BD6 273 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 ST3GAL6Q9Y274 331 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 SLC33A1O00400 549 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 TP53I11O14683 189 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 ONECUT2O95948 504 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 EWSR1Q01844 656 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 IL13RA2Q14627 380 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 GNMTQ14749 295 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 SOHLH1Q5JUK2 328 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 MAML2Q8IZL2 1156 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 C10orf35Q96D05 121 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 GPHA2Q96T91 129 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 SYT3Q9BQG1 590 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 CHRDQ9H2X0 955 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 STRAPQ9Y3F4 350 aaKnown RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 TNFSF11O14788 317 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 BCAT2O15382 392 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 AADACP22760 399 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 RHEBQ15382 184 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 GUSBP11Q6P575 273 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 LRTM2Q8N967 370 aa15.14■□□□□ 0.01
SCARF1-205ENST00000571272 ZFP62Q8NB50 900 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 ZMAT5Q9UDW3 170 aaKnown RBP15.14■□□□□ 0.01
SCARF1-205ENST00000571272 CCDC163A0A0D9SF12 145 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 NKX2-6A6NCS4 301 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 EIF1BO60739 113 aaKnown RBP15.13■□□□□ 0.01
SCARF1-205ENST00000571272 RAB5CP51148 216 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 Q6ZPA2 131 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 Q6ZSR3 168 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 ZIC4Q8N9L1 334 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 SUMF2Q8NBJ7 301 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 OR2C1O95371 312 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 CCL3P10147 92 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 RPS23P62266 143 aaKnown RBP15.13■□□□□ 0.01
SCARF1-205ENST00000571272 POLR2GP62487 172 aaKnown RBP eCLIP15.13■□□□□ 0.01
SCARF1-205ENST00000571272 CNN3Q15417 329 aaKnown RBP15.13■□□□□ 0.01
SCARF1-205ENST00000571272 OSR2Q8N2R0 312 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 KDF1Q8NAX2 398 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-205ENST00000571272 OR2G3Q8NGZ4 309 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 ANGPTL4Q9BY76 406 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 MAGT1Q9H0U3 335 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF286AQ9HBT8 521 aa15.13■□□□□ 0.01
SCARF1-205ENST00000571272 K7N7A8 449 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 AP4M1O00189 453 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 NRASP01111 189 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 AFF3P51826 1226 aaKnown RBP15.12■□□□□ 0.01
SCARF1-205ENST00000571272 HERV-K104P61576 105 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 IGSF11Q5DX21 431 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 ACER2Q5QJU3 275 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 FOXL2NBQ6ZUU3 175 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 TCTEX1D2Q8WW35 142 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 BOD1Q96IK1 185 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 P4HTMQ9NXG6 502 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 C19orf25Q9UFG5 118 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-205ENST00000571272 FOXD3Q9UJU5 478 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-205ENST00000571272 MMP24Q9Y5R2 645 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 VPS13AQ96RL7 3174 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 TRBV23-1A0A0A0MS06 115 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 A0A1W2PQM1 296 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF727A8MUV8 499 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 CRYGSP22914 178 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 LMO1P25800 156 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 PMELP40967 661 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 TSC22D1Q15714 1073 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 FAM27BQ5VT28 67 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF385CQ66K41 422 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-205ENST00000571272 OR2C3Q8N628 320 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 SLC39A7Q92504 469 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 MOB3AQ96BX8 217 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF442Q9H7R0 627 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 CRLF2Q9HC73 371 aa15.12■□□□□ 0.01
SCARF1-205ENST00000571272 CACNA1EQ15878 2313 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 A0A0J9YW62 118 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms