RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NKX3-1Q99801 234 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 YTHDF1Q9BYJ9 559 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 SIRPDQ9H106 197 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 RHOFQ9HBH0 211 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 NOX4Q9NPH5 578 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 CKLFQ9UBR5 152 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 MAGEA13PA6NCF6 341 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 ZNF737O75373 536 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 HAND1O96004 215 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 CHRM2P08172 466 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 HSMCR30P0CW71 290 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 CAPZA1P52907 286 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 ARF6P62330 175 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 MLLT11Q13015 90 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 ACSM3Q53FZ2 586 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 LIPKQ5VXJ0 399 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 TNFAIP8L1Q8WVP5 186 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 THRSPQ92748 146 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 WDFY2Q96P53 400 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 TBX15Q96SF7 602 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 GPER1Q99527 375 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 TMED9Q9BVK6 235 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 FAM234AQ9H0X4 552 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 FOXJ3Q9UPW0 622 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 ATRQ13535 2644 aa18.74■□□□□ 0.59
SFSWAP-204ENST00000535399 K7N7A8 449 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 MRPS14O60783 128 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 TK1P04183 234 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 IGHV4-38-2P0DP08 117 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 MAPK3P27361 379 aaPredicted RBP18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 DUSP1P28562 367 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 OR3A4PP47883 348 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 FIP1L1Q6UN15 594 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 ASCL4Q6XD76 172 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 MGLLQ99685 303 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 ACOT13Q9NPJ3 140 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 NUP50Q9UKX7 468 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 KPTNQ9Y664 436 aa18.73■□□□□ 0.59
SFSWAP-204ENST00000535399 TRBV23-1A0A0A0MS06 115 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 TMEM82A0PJX8 343 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 SC5DO75845 299 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 TOX4O94842 621 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 CPEP16870 476 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 ZNF93P35789 620 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 PTGFRP43088 359 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 GP2P55259 537 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 SNU13P55769 128 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 SCGB2A2Q13296 93 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 SPIN3Q5JUX0 258 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 METTL11BQ5VVY1 283 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 ZNF367Q7RTV3 350 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 KIR3DL3Q8N743 410 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 PCGF1Q9BSM1 259 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 GSTK1Q9Y2Q3 226 aa18.72■□□□□ 0.59
SFSWAP-204ENST00000535399 IGHV3OR16-10A0A075B7F0 116 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 EMX1Q04741 257 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 FAM27D1Q5T7N8 215 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 ELP2Q6IA86 826 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 C17orf107Q6ZR85 190 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 PHC2Q8IXK0 858 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 ASCC1Q8N9N2 400 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 SNX22Q96L94 193 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 FAM192AQ9GZU8 254 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 C19orf12Q9NSK7 152 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 ONECUT1Q9UBC0 465 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 ZNF69Q9UC07 566 aa18.71■□□□□ 0.59
SFSWAP-204ENST00000535399 TRAV40A0A0B4J280 105 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 MTNR1BP49286 362 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 RPS25P62851 125 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 TUSC1Q2TAM9 212 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 LYPD6Q86Y78 171 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 Q8N7P7 452 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 Q8NFD4 153 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 TMEM203Q969S6 136 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 PPIL3Q9H2H8 161 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 GLS2Q9UI32 602 aa18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 SF3B6Q9Y3B4 125 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-204ENST00000535399 A0A1W2PQ09 198 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 PSPNO60542 156 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 CDRT1O95170 752 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 BMXP51813 675 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 RPL31P62899 125 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 Q6P435 159 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 TMEM91Q6ZNR0 172 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 CEACAM19Q7Z692 300 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 FAM185AQ8N0U4 392 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 SPARTQ8N0X7 666 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 OR8H2Q8N162 312 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 OR4M1Q8NGD0 313 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 OR10K1Q8NGX5 313 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 C22orf15Q8WYQ4 148 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 OCEL1Q9H607 264 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 EXOSC4Q9NPD3 245 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 IL36GQ9NZH8 169 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 LRRC42Q9Y546 428 aa18.69■□□□□ 0.58
SFSWAP-204ENST00000535399 SH2D1BO14796 132 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 OR2H2O95918 312 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 MAS1P04201 325 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 PDCD1Q15116 288 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 RSU1Q15404 277 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms