RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 VPS13CQ709C8 3753 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 LGALS8O00214 317 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 PDCD5O14737 125 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ANGPTL7O43827 346 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NXPH2O95156 264 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 MUC1P15941 1255 aaPredicted RBP8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ADRA2CP18825 462 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 PTGFRP43088 359 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 RPL5P46777 297 aaKnown RBP8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 OR3A4PP47883 348 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 PSMD7P51665 324 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 GMFBP60983 142 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ZMYND11Q15326 602 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 MICBQ29980 383 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 SMIM21Q3B7S5 101 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ZNF404Q494X3 552 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 TMEM155Q4W5P6 130 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 TEX36Q5VZQ5 186 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 SFRP4Q6FHJ7 346 aaPredicted RBP8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 LRRC28Q86X40 367 aaPredicted RBP8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 SPICQ8N5J4 248 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 C19orf18Q8NEA5 215 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 PXT1Q8NFP0 134 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ZNF488Q96MN9 340 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 KCTD7Q96MP8 289 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 GAL3ST1Q99999 423 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NRIP2Q9BQI9 281 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 UQCC2Q9BRT2 126 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 SSBP3Q9BWW4 388 aaPredicted RBP8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 REG4Q9BYZ8 158 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 WDR13Q9H1Z4 485 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NARFLQ9H6Q4 476 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 RHOFQ9HBH0 211 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 MTCH1Q9NZJ7 389 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 DNAJB11Q9UBS4 358 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 OTOGQ6ZRI0 2925 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 AKAP9Q99996 3911 aa8.45□□□□□ -1.06
RAB11FIP3-211ENST00000495663 CR1P17927 2039 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 IGHV3OR15-7A0A075B7D8 119 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 IGKV1-12A0A0C4DH73 117 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 WNT9BO14905 357 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NDUFA2O43678 99 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 KDM4BO94953 1096 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 IGKV1D-12P01611 117 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 HEXAP06865 529 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 RAB3BP20337 219 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 BCL3P20749 454 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 USF1P22415 310 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 RANBP1P43487 201 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 MTNR1BP49286 362 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ERVK11-1P61568 191 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 HOXA4Q00056 320 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 LOXL1Q08397 574 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 RSU1Q15404 277 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 AWAT2Q6E213 333 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 FIP1L1Q6UN15 594 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 TEPPQ6URK8 271 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 SPNS3Q6ZMD2 512 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ACP7Q6ZNF0 438 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 DCDC5Q6ZRR9 648 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 TPRA1Q86W33 373 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 LYPD6Q86Y78 171 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 FAM90A1Q86YD7 464 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 BATF2Q8N1L9 274 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 DEFB108BQ8NET1 73 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 EMG1Q92979 244 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 C12orf43Q96C57 262 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NKX3-1Q99801 234 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 TMEM246Q9BRR3 403 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 METTL9Q9H1A3 318 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ELL3Q9HB65 397 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 TMEM165Q9HC07 324 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 HES4Q9HCC6 221 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 PCDHB16Q9NRJ7 776 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NLKQ9UBE8 527 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ING4Q9UNL4 249 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 MRPS28Q9Y2Q9 187 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 AK6Q9Y3D8 172 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 V9GY05 133 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 CCDC168Q8NDH2 2452 aa8.44□□□□□ -1.06
RAB11FIP3-211ENST00000495663 YLPM1P49750 1951 aaKnown RBP8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 IGHV4-61A0A0C4DH41 118 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 OR2AT4A6NND4 320 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 CEACAM18A8MTB9 384 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ZNF780AO75290 641 aaPredicted RBP8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 CDRT1O95170 752 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 GYPAP02724 150 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 CSTBP04080 98 aaKnown RBP8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 HTR2CP28335 458 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 NPBWR2P48146 333 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 BMXP51813 675 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 LSM3P62310 102 aaKnown RBP8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 LSAMPQ13449 338 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 GPR176Q14439 515 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 C1orf100Q5SVJ3 147 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 GPR107Q5VW38 600 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 ASCL4Q6XD76 172 aa8.43□□□□□ -1.06
RAB11FIP3-211ENST00000495663 C1QL2Q7Z5L3 287 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms