RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
USB1-212ENST00000566082 OR2B11Q5JQS5 317 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 NSUN5P2Q63ZY6 315 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 FDX2Q6P4F2 183 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 TMEM37Q8WXS4 190 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 VOPP1Q96AW1 172 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 MRPL38Q96DV4 380 aaKnown RBP9.28□□□□□ -0.92
USB1-212ENST00000566082 OPA3Q9H6K4 179 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 G6PC2Q9NQR9 355 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 GSN-AS1Q9NRJ2 163 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 ASXL3Q9C0F0 2248 aa9.27□□□□□ -0.92
USB1-212ENST00000566082 H0YIZ8 118 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 MRPL33O75394 65 aaKnown RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 SEC11BP0C7V7 166 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 CARD18P57730 90 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 DLK1P80370 383 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 H3F3AP84243 136 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 CPT1CQ8TCG5 803 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 MYOZ1Q9NP98 299 aaPredicted RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 MPDZO75970 2070 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 A0A087X0M5 115 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 KIR2DS1A0A191URI9 304 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 A0A1B0GX30 115 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 LILRA5A6NI73 299 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 LIPT2A6NK58 231 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 SEC14L6B5MCN3 397 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 CLDN34H7C241 214 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 ACAA1P09110 424 aaPredicted RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 PNLIPP16233 465 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 SPINK2P20155 84 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 KIR2DS4P43632 304 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 FGF8P55075 233 aaPredicted RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 IL13RA2Q14627 380 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 KIR2DS1Q14954 304 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 OR4A4PQ8NGN8 299 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 GNRHR2Q96P88 292 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 ABI3Q9P2A4 366 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 PPP1R3CQ9UQK1 317 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 BTBD17A6NE02 478 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 EN2P19622 333 aaPredicted RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 KLK2P20151 261 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 G0S2P27469 103 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 PTGER4P35408 488 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 CD200P41217 278 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 CCR5P51681 352 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 TMEM267Q0VDI3 215 aaPredicted RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 NCR3LG1Q68D85 454 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 ZNF66Q6ZN08 573 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 LIAT1Q6ZQX7 453 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 OR10J5Q8NHC4 309 aa9.27□□□□□ -0.93
USB1-212ENST00000566082 ESRP2Q9H6T0 727 aaKnown RBP9.27□□□□□ -0.93
USB1-212ENST00000566082 FNDC1Q4ZHG4 1894 aaPredicted RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 ZNF816-ZNF321PA0A0X1KG74 233 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 C3orf85A0A1B0GTC6 90 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ISG15P05161 165 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ZNF735P0CB33 412 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ATP6V0CP27449 155 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 IL2RGP31785 369 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 P2RY1P47900 373 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 NOVA1P51513 510 aaKnown RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 SUMO3P55854 103 aaPredicted RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 TAS2R30P59541 319 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 FAM3AP98173 230 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 PMP22Q01453 160 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 EWSR1Q01844 656 aaKnown RBP eCLIP9.26□□□□□ -0.93
USB1-212ENST00000566082 LTC4SQ16873 150 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 GAB4Q2WGN9 574 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 OR11L1Q8NGX0 322 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 OR4F5Q8NH21 305 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ZNF519Q8TB69 540 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ZNF721Q8TF20 911 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 EXTL1Q92935 676 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 OR4F4Q96R69 305 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 SOX7Q9BT81 388 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 A0A1W2PQD3 144 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 GEMIN2O14893 280 aaKnown RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 VAMP5O95183 116 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 IL2RAP01589 272 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ZNF708P17019 499 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 HAAOP46952 286 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 RPS16P62249 146 aaKnown RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 FOXK1P85037 733 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 RUNX1Q01196 453 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 LHFPL2Q6ZUX7 228 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 LRRC75AQ8NAA5 344 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 SPSB1Q96BD6 273 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 NTNG2Q96CW9 530 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 SH3BGRL3Q9H299 93 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 HDGFL3Q9Y3E1 203 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 TIMM8BQ9Y5J9 83 aaPredicted RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 SCN5AQ14524 2016 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 A0A1B0GTQ1 180 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 PDGFBP01127 241 aaPredicted RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 FUT3P21217 361 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 SSR4P51571 173 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 DYNLT3P51808 116 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 HLA-DRB3P79483 266 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 MPV17LQ2QL34 196 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms