RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 AQP3Q92482 292 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 TRIM63Q969Q1 353 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 CREB3L1Q96BA8 519 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 S100PBPQ96BU1 408 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 CMBLQ96DG6 245 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 RAB3CQ96E17 227 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 SEH1LQ96EE3 360 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 MARS2Q96GW9 593 aaKnown RBP3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 RNF170Q96K19 258 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 C1orf147Q96MC9 270 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPACA5Q96QH8 159 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 DMRTA2Q96SC8 542 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 GAL3ST1Q99999 423 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 MICU1Q9BPX6 476 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 MARVELD1Q9BSK0 173 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 TM2D1Q9BX74 207 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 C1QTNF6Q9BXI9 259 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 CACNG6Q9BXT2 260 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 PKIBQ9C010 78 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 SELENOIQ9C0D9 397 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 DPAGT1Q9H3H5 408 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLK3Q9H4B4 646 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM100Q9NV29 134 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 HSF4Q9ULV5 492 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 MEMO1Q9Y316 297 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 NUBP2Q9Y5Y2 271 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 CADP27708 2225 aa3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 DIDO1Q9BTC0 2240 aaKnown RBP3.4□□□□□ -1.87
HMGB1P37-201ENST00000439613 COL6A6A6NMZ7 2263 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 USP24Q9UPU5 2620 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 hCG_2014768A0A024R1R8 64 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 TRGV8A0A0C4DH27 118 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 IGHV1-18A0A0C4DH31 117 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 A0A1B0GUH1 482 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 A0A1W2PR80 420 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 FUOMA2VDF0 154 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 LRP5LA4QPB2 252 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 IQCF6A8MYZ5 107 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF736B4DX44 427 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF732B4DXR9 585 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 M0R1B8 84 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 CCL21O00585 134 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 LANCL1O43813 399 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 GLAP06280 429 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ACAA1P09110 424 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 AKAIN1P0CW23 69 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF250P15622 560 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPNP16150 400 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 HIST1H1DP16402 221 aaKnown RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PI3P19957 117 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SERPINA2P20848 420 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 FUT3P21217 361 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 KITLGP21583 273 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 CA6P23280 308 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PTAFRP25105 342 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 BLVRBP30043 206 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 CHRNB4P30926 498 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 GLRXP35754 106 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 KIR2DL3P43628 341 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ASCL1P50553 236 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF83P51522 516 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 GPM6AP51674 278 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 GNG2P59768 71 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 MRPS15P82914 257 aaKnown RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 NAAAQ02083 359 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 IL24Q13007 206 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLA2G7Q13093 441 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ARFRP1Q13795 201 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZMYND11Q15326 602 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR8G1Q15617 311 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 CR1LQ2VPA4 569 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PCGF3Q3KNV8 242 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF260Q3ZCT1 412 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 FBXL19-AS1Q494R0 122 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLA1AQ53H76 456 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PRR30Q53SZ7 412 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ACTBL2Q562R1 376 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPATA46Q5T0L3 261 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 RSBN1Q5VWQ0 802 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 MBNL2Q5VZF2 373 aaKnown RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OLFML2AQ68BL7 652 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR2T2Q6IF00 324 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR10K2Q6IF99 312 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 RGS7BPQ6MZT1 257 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 CRIP3Q6Q6R5 217 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 FIP1L1Q6UN15 594 aaKnown RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 TEPPQ6URK8 271 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 Q6ZTK2 550 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SLC25A26Q70HW3 274 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 BTN2A1Q7KYR7 527 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 LINC00596Q86U02 117 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 BIVMQ86UB2 503 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OSR2Q8N2R0 312 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 RPRMLQ8N4K4 120 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF611Q8N823 705 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM104Q8NE00 496 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR8G5Q8NG78 346 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR5D18Q8NGL1 313 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms