RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 BCL3P20749 454 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 CASP6P55212 293 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 NKX6-1P78426 367 aaPredicted RBP12.96□□□□□ -0.33
ACTB-204ENST00000425660 ARFRP1Q13795 201 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 ZMYND11Q15326 602 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 RNASE10Q5GAN6 216 aaKnown RBP12.96□□□□□ -0.33
ACTB-204ENST00000425660 WDR86Q86TI4 376 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 HOGA1Q86XE5 327 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 EMG1Q92979 244 aaKnown RBP12.96□□□□□ -0.33
ACTB-204ENST00000425660 SLC25A21Q9BQT8 299 aaPredicted RBP12.96□□□□□ -0.33
ACTB-204ENST00000425660 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.33
ACTB-204ENST00000425660 ADGRG4Q8IZF6 3080 aa12.96□□□□□ -0.34
ACTB-204ENST00000425660 TMEM210A6NLX4 147 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 F8VVB4 439 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 F8VWA3 439 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 TRAPPC2LH3BP13 241 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 M0QYG6 137 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 PDCD6O75340 191 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 CCNKO75909 580 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 GCH1P30793 250 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 HRH1P35367 487 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
ACTB-204ENST00000425660 GIMAP1Q8WWP7 306 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 MED30Q96HR3 178 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 NKIRAS2Q9NYR9 191 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 ZNF581Q9P0T4 197 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 TRGV8A0A0C4DH27 118 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 ARPC1BO15143 372 aaKnown RBP12.95□□□□□ -0.34
ACTB-204ENST00000425660 MLNRO43193 412 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 AMY2AP04746 511 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 ZNF250P15622 560 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 GLRXP35754 106 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 ZNF154Q13106 437 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 MPV17LQ2QL34 196 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 VAX1Q5SQQ9 334 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 RGS7BPQ6MZT1 257 aaPredicted RBP12.95□□□□□ -0.34
ACTB-204ENST00000425660 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 BPIFB2Q8N4F0 458 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 PRRT1Q99946 306 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 POU2F3Q9UKI9 436 aa12.95□□□□□ -0.34
ACTB-204ENST00000425660 CACNA1BQ00975 2339 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 PYCARD-AS1I3L0S3 204 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 ACAA1P09110 424 aaPredicted RBP12.94□□□□□ -0.34
ACTB-204ENST00000425660 FUT3P21217 361 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 FABP6P51161 128 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 OR8G1Q15617 311 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 ST3GAL2Q16842 350 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 IDO2Q6ZQW0 420 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 ST6GAL2Q96JF0 529 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 SULT4A1Q9BR01 284 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 ETAA1Q9NY74 926 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
ACTB-204ENST00000425660 POLDIP2Q9Y2S7 368 aa12.94□□□□□ -0.34
ACTB-204ENST00000425660 DISC1C4P0D8 188 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 ERVH48-1M5A8F1 160 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 TIMM8AO60220 97 aaPredicted RBP12.93□□□□□ -0.34
ACTB-204ENST00000425660 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
ACTB-204ENST00000425660 IGHV3-13P01766 116 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 DTYMKP23919 212 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 CD40P25942 277 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 ERVK11-1P61568 191 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 MICBQ29980 383 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 Q6ZR03 302 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 Q8IYB0 196 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 SPERTQ8NA61 448 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 SCCPDHQ8NBX0 429 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 OR13C8Q8NGS7 320 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
ACTB-204ENST00000425660 TLNRD1Q9H1K6 362 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 AK3Q9UIJ7 227 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 EDARQ9UNE0 448 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 RELNP78509 3460 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 SHANK1Q9Y566 2161 aa12.93□□□□□ -0.34
ACTB-204ENST00000425660 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
ACTB-204ENST00000425660 H0YL77 283 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 H3BUI4 141 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 RHBDL1O75783 438 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 IL5P05113 134 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
ACTB-204ENST00000425660 METTL11BQ5VVY1 283 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 PCSK4Q6UW60 755 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 GLDNQ6ZMI3 551 aaPredicted RBP12.92□□□□□ -0.34
ACTB-204ENST00000425660 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
ACTB-204ENST00000425660 ARRDC1Q8N5I2 433 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 OR13G1Q8NGZ3 307 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms