RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SSUH2Q9Y2M2 353 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 V9GYS6 101 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 A0A1W2PQD3 144 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 KIR3DL2P43630 455 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 NPBWR1P48145 328 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 UBALD2Q8IYN6 164 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 TMEM104Q8NE00 496 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 FAM173AQ9BQD7 235 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 NGBQ9NPG2 151 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 MRPS18BQ9Y676 258 aaKnown RBP14.29□□□□□ -0.12
GABRB3-215ENST00000622697 LRRC30A6NM36 301 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 PDGFBP01127 241 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-215ENST00000622697 CRYAAP02489 173 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 NGFRP08138 427 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 SLC25A6P12236 298 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 RAC1P63000 192 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-215ENST00000622697 ZNF721Q8TF20 911 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
GABRB3-215ENST00000622697 GALMQ96C23 342 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 AMELYQ99218 206 aa14.29□□□□□ -0.12
GABRB3-215ENST00000622697 HES1Q14469 280 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 OR5C1Q8NGR4 320 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 TAAR9Q96RI9 348 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 PCED1AQ9H1Q7 454 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 WDR13Q9H1Z4 485 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 IL2RAP01589 272 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 POU2F2P09086 479 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 CRYBA2P53672 197 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 GNB1P62873 340 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 D2HGDHQ8N465 521 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 PIKFYVEQ9Y2I7 2098 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 UNC13CQ8NB66 2214 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 C3orf85A0A1B0GTC6 90 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 FIGNL2A6NMB9 653 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 INPP5JQ15735 1006 aaPredicted RBP14.28□□□□□ -0.12
GABRB3-215ENST00000622697 ACTR3CQ9C0K3 210 aaPredicted RBP14.28□□□□□ -0.12
GABRB3-215ENST00000622697 SHARPINQ9H0F6 387 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 PILRAQ9UKJ1 303 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 FGF7P21781 194 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 PRSS54Q6PEW0 395 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 WFDC8Q8IUA0 241 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 DYRK2Q92630 601 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 NDRG3Q9UGV2 375 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 VSIG8P0DPA2 414 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 DEFA4P12838 97 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 CEACAM6P40199 344 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 C3AR1Q16581 482 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 NUBPLQ8TB37 319 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 ADAT1Q9BUB4 502 aaKnown RBP14.28□□□□□ -0.12
GABRB3-215ENST00000622697 WNT16Q9UBV4 365 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 MMP24Q9Y5R2 645 aa14.28□□□□□ -0.12
GABRB3-215ENST00000622697 ZNF92Q03936 586 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 ZNF528Q3MIS6 628 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 SPINK9Q5DT21 86 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 MITD1Q8WV92 249 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 NAA60Q9H7X0 242 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 TRGV5A0A0B4J1U4 118 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 A0A1W2PPQ1 181 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 TMEM33P57088 247 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 MICBQ29980 383 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 SARAFQ96BY9 339 aa14.27□□□□□ -0.12
GABRB3-215ENST00000622697 PRSS44E7EML9 344 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 GEMIN2O14893 280 aaKnown RBP14.27□□□□□ -0.13
GABRB3-215ENST00000622697 IGHV3-13P01766 116 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 IGHV3-7P01780 117 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 CCL3P10147 92 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 GNG3P63215 75 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 UQCC3Q6UW78 93 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 OR13D1Q8NGV5 346 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 SCN2AQ99250 2005 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.13
GABRB3-215ENST00000622697 SLC25A4P12235 298 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 ZFP64Q9NPA5 681 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 ATP23Q9Y6H3 246 aa14.27□□□□□ -0.13
GABRB3-215ENST00000622697 ZNHIT1O43257 154 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 OR10J4P0C629 311 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 HABP2Q14520 560 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-215ENST00000622697 PGLYRP3Q96LB9 341 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 PDCD6O75340 191 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 THBS3P49746 956 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 SLC26A10Q8NG04 563 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 ALPK2Q86TB3 2170 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 F6UZH7 168 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 MASP2O00187 686 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 ABCD4O14678 606 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 SPRY3O43610 288 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 CALCRP30988 508 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 DCAF12L2Q5VW00 463 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 AQP7P3A6NL99 342 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 HLA-DQB1P01920 261 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 APOA2P02652 100 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 POLR2GP62487 172 aaKnown RBP eCLIP14.26□□□□□ -0.13
GABRB3-215ENST00000622697 ZNF429Q86V71 674 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 ZNF561Q8N587 486 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 TRAF4Q9BUZ4 470 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-215ENST00000622697 CNIH1O95406 144 aa14.26□□□□□ -0.13
GABRB3-215ENST00000622697 VSIG10L2P0DP72 767 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms