RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 METAP1DQ6UB28 335 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 WDR82Q6UXN9 313 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 SLC25A26Q70HW3 274 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 CDH24Q86UP0 819 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 CMTM4Q8IZR5 234 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 OR5D18Q8NGL1 313 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 OR6M1Q8NGM8 313 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 OR6Q1Q8NGQ2 317 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 OR10K1Q8NGX5 313 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 OR10Z1Q8NGY1 313 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 MCFD2Q8NI22 146 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 TBC1D15Q8TC07 691 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 Q8TCH9 128 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 TNFAIP8L1Q8WVP5 186 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 NRGNQ92686 78 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ERGIC1Q969X5 290 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 PTX4Q96A99 478 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 SEH1LQ96EE3 360 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ZNF488Q96MN9 340 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 CMTM3Q96MX0 182 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 VRK1Q99986 396 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 NRIP2Q9BQI9 281 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ADAT1Q9BUB4 502 aaKnown RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 LPAR5Q9H1C0 372 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 WDR13Q9H1Z4 485 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ABCG5Q9H222 651 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 HEATR1Q9H583 2144 aaKnown RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 UBTD1Q9HAC8 227 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 LIN7BQ9HAP6 207 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 SEBOXQ9HB31 216 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 PLGRKTQ9HBL7 147 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 NEK6Q9HC98 313 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 HES4Q9HCC6 221 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 UFSP2Q9NUQ7 469 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ZNF701Q9NV72 531 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 C1orf123Q9NWV4 160 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 DCAF16Q9NXF7 216 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 IL36GQ9NZH8 169 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 CCDC59Q9P031 241 aaKnown RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 COMMD3Q9UBI1 195 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 GHRLQ9UBU3 117 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 FBXO9Q9UK97 447 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 RAB22AQ9UL26 194 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 MRPS28Q9Y2Q9 187 aaKnown RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 CACNG2Q9Y698 323 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 CELSR2Q9HCU4 2923 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 USP9YO00507 2555 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 ROS1P08922 2347 aa5□□□□□ -1.61
USP39-213ENST00000467885 A0A0A6YYD4 124 aa5□□□□□ -1.61
USP39-213ENST00000467885 FOXI3A8MTJ6 420 aaPredicted RBP5□□□□□ -1.61
USP39-213ENST00000467885 TMEM178BH3BS89 294 aa5□□□□□ -1.61
USP39-213ENST00000467885 J3QT63 122 aa5□□□□□ -1.61
USP39-213ENST00000467885 RAB27BO00194 218 aa5□□□□□ -1.61
USP39-213ENST00000467885 WNT9BO14905 357 aa5□□□□□ -1.61
USP39-213ENST00000467885 AKR7A2O43488 359 aa5□□□□□ -1.61
USP39-213ENST00000467885 HPGDSO60760 199 aa5□□□□□ -1.61
USP39-213ENST00000467885 NOL3O60936 208 aaKnown RBP5□□□□□ -1.61
USP39-213ENST00000467885 RP2O75695 350 aa5□□□□□ -1.61
USP39-213ENST00000467885 CLPXO76031 633 aa5□□□□□ -1.61
USP39-213ENST00000467885 HTR3BO95264 441 aa5□□□□□ -1.61
USP39-213ENST00000467885 BPNT1O95861 308 aa5□□□□□ -1.61
USP39-213ENST00000467885 HLA-DQB1P01920 261 aa5□□□□□ -1.61
USP39-213ENST00000467885 OCMP0CE72 109 aaPredicted RBP5□□□□□ -1.61
USP39-213ENST00000467885 UBBP0CG47 229 aa5□□□□□ -1.61
USP39-213ENST00000467885 PGA5P0DJD9 388 aa5□□□□□ -1.61
USP39-213ENST00000467885 PAX1P15863 534 aa5□□□□□ -1.61
USP39-213ENST00000467885 RAB6AP20340 208 aa5□□□□□ -1.61
USP39-213ENST00000467885 BCL3P20749 454 aa5□□□□□ -1.61
USP39-213ENST00000467885 TNFSF4P23510 183 aa5□□□□□ -1.61
USP39-213ENST00000467885 LMO1P25800 156 aa5□□□□□ -1.61
USP39-213ENST00000467885 SSTR2P30874 369 aa5□□□□□ -1.61
USP39-213ENST00000467885 POU3F4P49335 361 aa5□□□□□ -1.61
USP39-213ENST00000467885 ART1P52961 327 aa5□□□□□ -1.61
USP39-213ENST00000467885 SCAND1P57086 179 aa5□□□□□ -1.61
USP39-213ENST00000467885 MRPS11P82912 194 aaKnown RBP5□□□□□ -1.61
USP39-213ENST00000467885 MZT1Q08AG7 82 aa5□□□□□ -1.61
USP39-213ENST00000467885 LSAMPQ13449 338 aa5□□□□□ -1.61
USP39-213ENST00000467885 GPR176Q14439 515 aa5□□□□□ -1.61
USP39-213ENST00000467885 ZNF181Q2M3W8 571 aa5□□□□□ -1.61
USP39-213ENST00000467885 SLC22A6Q4U2R8 563 aa5□□□□□ -1.61
USP39-213ENST00000467885 FAM201AQ5SY85 155 aa5□□□□□ -1.61
USP39-213ENST00000467885 SIGIRRQ6IA17 410 aa5□□□□□ -1.61
USP39-213ENST00000467885 Q6P435 159 aa5□□□□□ -1.61
USP39-213ENST00000467885 LINC00299Q6ZSB3 139 aa5□□□□□ -1.61
USP39-213ENST00000467885 OR2W3Q7Z3T1 314 aa5□□□□□ -1.61
USP39-213ENST00000467885 MOGAT3Q86VF5 341 aa5□□□□□ -1.61
USP39-213ENST00000467885 GCSAMQ8N6F7 178 aa5□□□□□ -1.61
USP39-213ENST00000467885 POC1AQ8NBT0 407 aa5□□□□□ -1.61
USP39-213ENST00000467885 OR51T1Q8NGJ9 327 aa5□□□□□ -1.61
USP39-213ENST00000467885 KCNG3Q8TAE7 436 aa5□□□□□ -1.61
USP39-213ENST00000467885 NEU4Q8WWR8 484 aaPredicted RBP5□□□□□ -1.61
USP39-213ENST00000467885 YIPF5Q969M3 257 aa5□□□□□ -1.61
USP39-213ENST00000467885 SLAMF9Q96A28 289 aa5□□□□□ -1.61
USP39-213ENST00000467885 SLC25A38Q96DW6 304 aa5□□□□□ -1.61
USP39-213ENST00000467885 MRPS24Q96EL2 167 aaKnown RBP5□□□□□ -1.61
USP39-213ENST00000467885 CYYR1Q96J86 154 aa5□□□□□ -1.61
USP39-213ENST00000467885 DMRTB1Q96MA1 342 aa5□□□□□ -1.61
USP39-213ENST00000467885 GPER1Q99527 375 aa5□□□□□ -1.61
USP39-213ENST00000467885 MRI1Q9BV20 369 aa5□□□□□ -1.61
USP39-213ENST00000467885 TM2D1Q9BX74 207 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms