RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 IGHMP01871 453 aa12.71□□□□□ -0.38
TCOF1-202ENST00000377797 RAB5BP61020 215 aa12.71□□□□□ -0.38
TCOF1-202ENST00000377797 RIPPLY2Q5TAB7 128 aa12.71□□□□□ -0.38
TCOF1-202ENST00000377797 TMEM268Q5VZI3 342 aa12.71□□□□□ -0.38
TCOF1-202ENST00000377797 WDR89Q96FK6 387 aaPredicted RBP12.71□□□□□ -0.38
TCOF1-202ENST00000377797 LMX1BO60663 402 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 NKX2-1P43699 371 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-202ENST00000377797 C19orf57Q0VDD7 668 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 DHRS2Q13268 280 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 NLRC3Q7RTR2 1065 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 CLDN1O95832 211 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 MUC20Q8N307 709 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-202ENST00000377797 TMEM217Q8N7C4 229 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 ZDHHC22Q8N966 263 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 FBXO17Q96EF6 278 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 GFOD1Q9NXC2 390 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 A0A0U1RQV5 110 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 LRP5LA4QPB2 252 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 MST1P26927 711 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 EIF2S3LQ2VIR3 472 aaKnown RBP12.7□□□□□ -0.38
TCOF1-202ENST00000377797 UNQ9370/PRO34162Q6UXP9 181 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 FDCSPQ8NFU4 85 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 FREM3P0C091 2139 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 A0A0G2JMM0 328 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 A0A1W2PPB8 328 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 A0A1W2PRS3 328 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 KIR3DP1A8MWS1 328 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 F8W036 122 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 FSTP19883 344 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 PTAFRP25105 342 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 HLXQ14774 488 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-202ENST00000377797 MDP1Q86V88 176 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
TCOF1-202ENST00000377797 CPEB3Q8NE35 698 aaKnown RBP12.7□□□□□ -0.38
TCOF1-202ENST00000377797 SNRNP200O75643 2136 aaKnown RBP12.7□□□□□ -0.38
TCOF1-202ENST00000377797 IGKV1D-43A0A0B4J1Z2 117 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 AGFG2O95081 481 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 OR2B11Q5JQS5 317 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 FAM214BQ7L5A3 538 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 C1orf87Q8N0U7 546 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 NPIPB7O75200 414 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 MED6O75586 246 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 TPPPO94811 219 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 C19orf48Q6RUI8 117 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 OR5AP2Q8NGF4 316 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 PECRQ9BY49 303 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 PLXNA2O75051 1894 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 LRP3O75074 770 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 IFNA1P01562 189 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 ISG15P05161 165 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 CELA3AP09093 270 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 PPP1R1AQ13522 171 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 RAB31Q13636 194 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 SP6Q3SY56 376 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 SCCPDHQ8NBX0 429 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 HLA-DQB1P01920 261 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
TCOF1-202ENST00000377797 S100A12P80511 92 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 FADS6Q8N9I5 356 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 RNF150Q9ULK6 438 aa12.69□□□□□ -0.38
TCOF1-202ENST00000377797 TRBV5-7A0A0A0MS05 114 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 MEX3AA1L020 520 aaKnown RBP12.68□□□□□ -0.38
TCOF1-202ENST00000377797 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
TCOF1-202ENST00000377797 MPPED1O15442 326 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 ICMTO60725 284 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 IFNA4P05014 189 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 ADRB1P08588 477 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 ADRA2AP08913 450 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 ADRA2CP18825 462 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 FPR2P25090 351 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-202ENST00000377797 KLF9Q13886 244 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-202ENST00000377797 TMEM108Q6UXF1 575 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 ST7LQ8TDW4 575 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 NPAS1Q99742 590 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 FAM206AQ9NX38 181 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 STARD10Q9Y365 291 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 RPP30P78346 268 aaKnown RBP12.68□□□□□ -0.38
TCOF1-202ENST00000377797 ACOT7LQ6ZUV0 252 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-202ENST00000377797 PRSS50Q9UI38 385 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 TINAGQ9UJW2 476 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 CYTIPO60759 359 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 HNF4GQ14541 408 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 OR8U1Q8NH10 309 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 CNTNAP3BQ96NU0 1288 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 WDR13Q9H1Z4 485 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 FBXO7Q9Y3I1 522 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 GBF1Q92538 1859 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 OR2F2O95006 317 aa12.68□□□□□ -0.38
TCOF1-202ENST00000377797 NME2P22392 152 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms