RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 ZNF705GA8MUZ8 300 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 SOX15O60248 233 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 ZNF823P16415 610 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 IL12BP29460 328 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 MMP16P51512 607 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 HNRNPKP61978 463 aaKnown RBP eCLIP12.87□□□□□ -0.355e-8■■■■■ 33.2
TOP3B-201ENST00000357179 TMEM176BQ3YBM2 270 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 DNM1P34Q6PK57 102 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 ADAT3Q96EY9 351 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 PNO1Q9NRX1 252 aaKnown RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 DKKL1Q9UK85 242 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 CYP8B1Q9UNU6 501 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 RCL1Q9Y2P8 373 aaKnown RBP12.87□□□□□ -0.35
TOP3B-201ENST00000357179 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 SPTY2D1-AS1A0A0U1RR47 76 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 A6NIZ1 184 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 TSPAN2O60636 221 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 CA3P07451 260 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 CTSEP14091 401 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 RAP1BP61224 184 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 DCAF10Q5QP82 559 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 SLC26A10Q8NG04 563 aa12.87□□□□□ -0.35
TOP3B-201ENST00000357179 TMEM150CB9EJG8 249 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 MPIG6BO95866 241 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 FOLR1P15328 257 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 CTHP32929 405 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 MRPS21P82921 87 aaKnown RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 TFF2Q03403 129 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 METTL27Q8N6F8 245 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ZNF721Q8TF20 911 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 C1orf147Q96MC9 270 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 SEMA4FO95754 770 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 NUDT14O95848 222 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 LINC00614P0C842 121 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 FUT3P21217 361 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 SNU13P55769 128 aaKnown RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ARFRP1Q13795 201 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ZNF542PQ5EBM4 170 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 COA6Q5JTJ3 125 aaKnown RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 GRINAQ7Z429 371 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 PRR22Q8IZ63 422 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 OR1P1Q8NH06 330 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ARHGAP5-AS1Q96IT6 56 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 ST6GALNAC5Q9BVH7 336 aa12.86□□□□□ -0.35
TOP3B-201ENST00000357179 OPN3Q9H1Y3 402 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 MTIF3Q9H2K0 278 aaKnown RBP12.86□□□□□ -0.35
TOP3B-201ENST00000357179 XRCC2O43543 280 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CDC14BO60729 498 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 AHSA1O95433 338 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 DDAH2O95865 285 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 TK1P04183 234 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CAPZBP47756 277 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 FOXK1P85037 733 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 FZD2Q14332 565 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-201ENST00000357179 GLIPR1L1Q6UWM5 242 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 GALNTL5Q7Z4T8 443 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 OR4X1Q8NH49 305 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 TBL1XR1Q9BZK7 514 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 GPR27Q9NS67 375 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 IGKV3D-11A0A0A0MRZ8 115 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 NSG1A0A0A6YYJ2 146 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CRYM-AS1A6NIL9 109 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CLDN34H7C241 214 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 ZP4Q12836 540 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 TMEM31Q5JXX7 168 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 RNF144BQ7Z419 303 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CARFQ8N187 725 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 DNASE2BQ8WZ79 361 aa12.85□□□□□ -0.35
TOP3B-201ENST00000357179 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 NPIPB13A6NJU9 1138 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 NPIPB4C9JG80 1138 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 MPZL1O95297 269 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 NPSP0C0P6 89 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 FOXF1Q12946 379 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 SLC35G3Q8N808 338 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 OR5D14Q8NGL3 314 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 OR2G3Q8NGZ4 309 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 KCNG3Q8TAE7 436 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 DNAJA3Q96EY1 480 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 GAL3ST4Q96RP7 486 aa12.84□□□□□ -0.35
TOP3B-201ENST00000357179 CHRNA10Q9GZZ6 450 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms