RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LYRM4Q9HD34 91 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 GDE1Q9NZC3 331 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 DNAJC13O75165 2243 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 CHD3Q12873 2000 aaKnown RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 RER1O15258 196 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 DANCRP0C864 163 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 RAB4BP61018 213 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 RTL6Q6ICC9 239 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 TMEM156Q8N614 296 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 OR2C3Q8N628 320 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 ZNF321PQ8N8H1 164 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 OR11L1Q8NGX0 322 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 SDSLQ96GA7 329 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 LRRC3BQ96PB8 259 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 KLHDC3Q9BQ90 382 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 TXNIPQ9H3M7 391 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 MYO7BQ6PIF6 2116 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 SPRY1O43609 319 aaPredicted RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 SEC11BP0C7V7 166 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 ZNF121P58317 390 aaPredicted RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 HHEXQ03014 270 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 EMC4Q5J8M3 183 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 PHF19Q5T6S3 580 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 MAML2Q8IZL2 1156 aaPredicted RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 DEFB119Q8N690 84 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 OR52M1Q8NGK5 317 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 LPAR5Q9H1C0 372 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 PRDM13Q9H4Q3 707 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 UCK1Q9HA47 277 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 ASXL3Q9C0F0 2248 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 ZNF816-ZNF321PA0A0X1KG74 233 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 FCARP24071 287 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 HIST3H2BBQ8N257 126 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 GPR137CQ8N3F9 429 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 OR51H1Q8NH63 302 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 TSLPQ969D9 159 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 ANKRD9Q96BM1 317 aaPredicted RBP14.38□□□□□ -0.11
GPC1-201ENST00000264039 HIST1H2AAQ96QV6 131 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 MENTQ9BUN1 341 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 SLC25A31Q9H0C2 315 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 FAM60AQ9NP50 221 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 PARD6AQ9NPB6 346 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 DEDDO75618 318 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 FUT3P21217 361 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 PAX5Q02548 391 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 ATG4DQ86TL0 474 aaPredicted RBP14.38□□□□□ -0.11
GPC1-201ENST00000264039 IL22RA1Q8N6P7 574 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 M1APQ8TC57 530 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 PLEK2Q9NYT0 353 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 TIMM8BQ9Y5J9 83 aaPredicted RBP14.38□□□□□ -0.11
GPC1-201ENST00000264039 IGHV3-20A0A0C4DH32 117 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 CT45A8P0DMV1 189 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 CT45A9P0DMV2 189 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 ERGP11308 486 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 SPINK2P20155 84 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 P2RY1P47900 373 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 CT45A2Q5DJT8 189 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 PLAC9Q5JTB6 97 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 GKN2Q86XP6 184 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 IL1F10Q8WWZ1 152 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 TAAR9Q96RI9 348 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 PITPNC1Q9UKF7 332 aa14.38□□□□□ -0.11
GPC1-201ENST00000264039 CYR61O00622 381 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 PDGFBP01127 241 aaPredicted RBP14.37□□□□□ -0.11
GPC1-201ENST00000264039 CHRNA7P36544 502 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 PLAURQ03405 335 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 ZNF117Q03924 483 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 ELOBQ15370 118 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 SLC38A9Q8NBW4 561 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
GPC1-201ENST00000264039 HIST1H2BLQ99880 126 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 S1PR5Q9H228 398 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 SLC39A9Q9NUM3 307 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 HEATR1Q9H583 2144 aaKnown RBP14.37□□□□□ -0.11
GPC1-201ENST00000264039 H3BMH7 237 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 HBE1P02100 147 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 GNG10P50151 68 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 FOXO1Q12778 655 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 IQCJQ1A5X6 159 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 C10orf91Q5T1B1 145 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 MUCL1Q96DR8 90 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 VSTM2LQ96N03 204 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 MS4A10Q96PG2 267 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 HDGFL3Q9Y3E1 203 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 TMEM184BQ9Y519 407 aaPredicted RBP14.37□□□□□ -0.11
GPC1-201ENST00000264039 A0A0J9YY10 115 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 DBX1A6NMT0 343 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 IAPPP10997 89 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 CD33P20138 364 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 IL11P20809 199 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 RPS4Y1P22090 263 aaKnown RBP14.37□□□□□ -0.11
GPC1-201ENST00000264039 OR8G2PQ6IF36 304 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 ANKRD33Q7Z3H0 272 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 PAQR4Q8N4S7 273 aaPredicted RBP14.37□□□□□ -0.11
GPC1-201ENST00000264039 OR10A7Q8NGE5 316 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 RLN3Q8WXF3 142 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 TXN2Q99757 166 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 ZNF665Q9H7R5 613 aa14.37□□□□□ -0.11
GPC1-201ENST00000264039 TLCD2A6NGC4 264 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms