RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 VAPAQ9P0L0 249 aa2.3□□□□□ -2.04
VPS8-228ENST00000628962 Q9UF83 564 aa2.3□□□□□ -2.04
VPS8-228ENST00000628962 SCML1Q9UN30 329 aa2.3□□□□□ -2.04
VPS8-228ENST00000628962 TSSC4Q9Y5U2 329 aaPredicted RBP2.3□□□□□ -2.04
VPS8-228ENST00000628962 HEBP2Q9Y5Z4 205 aa2.3□□□□□ -2.04
VPS8-228ENST00000628962 MYO10Q9HD67 2058 aa2.3□□□□□ -2.04
VPS8-228ENST00000628962 CNOT1A5YKK6 2376 aaKnown RBP2.3□□□□□ -2.04
VPS8-228ENST00000628962 SPEF2Q9C093 1822 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 A0A0A6YYD5 115 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 A0A0A6YYH2 397 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 ANKRD20A5PA0PJZ0 165 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 A6NJ64 397 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 ZFP92A6NM28 416 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 SEC14L6B5MCN3 397 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 F8VZ95 297 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 KMOO15229 486 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 GATCO43716 136 aaKnown RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 ALOX12BO75342 701 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TRAPPC6AO75865 159 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 AHSA1O95433 338 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 RAB3DO95716 219 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 GCGP01275 180 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 EIF4EP06730 217 aaKnown RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 GIG44P09565 113 aaPredicted RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 OR8U9P0C7N5 309 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 P0C879 139 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 OR5H8P0DN80 308 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TCP1P17987 556 aaKnown RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 SYT1P21579 422 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TEAD1P28347 426 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 RBMXP38159 391 aaKnown RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 CEACAM3P40198 252 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 NCBP2P52298 156 aaKnown RBP eCLIP2.29□□□□□ -2.04
VPS8-228ENST00000628962 VSX2P58304 361 aaPredicted RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 SMARCB1Q12824 385 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 DMC1Q14565 340 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 MAD2L1BPQ15013 274 aaPredicted RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 QPRTQ15274 297 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 OR4D1Q15615 310 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TAL2Q16559 108 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 SLC25A30Q5SVS4 291 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 THEM4Q5T1C6 240 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 CD300LGQ6UXG3 332 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 SETD3Q86TU7 594 aaPredicted RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 CRLF3Q8IUI8 442 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 C12orf56Q8IXR9 622 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 GPD1LQ8N335 351 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 WDR31Q8NA23 367 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 CHST4Q8NCG5 386 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 OR6Q1Q8NGQ2 317 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 OR8U1Q8NH10 309 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 MRAPQ8TCY5 172 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 LRRC29Q8WV35 223 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TCEAL3Q969E4 200 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 RCN3Q96D15 328 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 DNAJC19Q96DA6 116 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 AURKBQ96GD4 344 aaPredicted RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 C16orf74Q96GX8 76 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 B3GALT6Q96L58 329 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 COL21A1Q96P44 957 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 CIB1Q99828 191 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 C7orf50Q9BRJ6 194 aaKnown RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 SPZ1Q9BXG8 430 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 CHRNA10Q9GZZ6 450 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 SLC38A1Q9H2H9 487 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 SAV1Q9H4B6 383 aaPredicted RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 MAT2BQ9NZL9 334 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 TMEM9Q9P0T7 183 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 PCYOX1Q9UHG3 505 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 MRPS18BQ9Y676 258 aaKnown RBP2.29□□□□□ -2.04
VPS8-228ENST00000628962 ITPR3Q14573 2671 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 MYO7AQ13402 2215 aa2.29□□□□□ -2.04
VPS8-228ENST00000628962 NF1P21359 2839 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 IGLV3-10A0A075B6K4 115 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 SPAARA0A1B0GVQ0 90 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 TVP23AA6NH52 213 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 GJE1A6NN92 205 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 SYCE1LA8MT33 242 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 ANKRD65E5RJM6 399 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 E7ENQ6 273 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 SMLR1H3BR10 107 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 CLDN34H7C241 214 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 K7EN84 100 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 hCG_2039718K7EN88 272 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 PEX7O00628 323 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 COCHO43405 550 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 HOXC4P09017 264 aaPredicted RBP2.28□□□□□ -2.04
VPS8-228ENST00000628962 SLC35E2BP0CK96 405 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 SMIM10L1P0DMW3 83 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 ERGP11308 486 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 RAB3BP20337 219 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 USF1P22415 310 aaPredicted RBP2.28□□□□□ -2.04
VPS8-228ENST00000628962 WARSP23381 471 aaKnown RBP2.28□□□□□ -2.04
VPS8-228ENST00000628962 HTR1EP28566 365 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 KDELR2P33947 212 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 MAGEA6P43360 314 aa2.28□□□□□ -2.04
VPS8-228ENST00000628962 RANBP1P43487 201 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms