RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PSG4Q00888 419 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF92Q03936 586 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 CLN3Q13286 438 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 TRA2AQ13595 282 aaKnown RBP eCLIP9.89□□□□□ -0.83
TOP3A-217ENST00000584582 TMEM217Q8N7C4 229 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 M1APQ8TC57 530 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 HEATR1Q9H583 2144 aaKnown RBP9.89□□□□□ -0.83
TOP3A-217ENST00000584582 TMEM9BQ9NQ34 198 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 DUSP13Q9UII6 198 aa9.89□□□□□ -0.83
TOP3A-217ENST00000584582 HSD17B6O14756 317 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF728P0DKX0 622 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PRKACAP17612 351 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PSMB6P28072 239 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 TAS2R46P59540 309 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PLAC9Q5JTB6 97 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 DCAF10Q5QP82 559 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 C17orf78Q8N4C9 275 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ANGPTL6Q8NI99 470 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-217ENST00000584582 UQCC2Q9BRT2 126 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 CDH20Q9HBT6 801 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 OBP2BQ9NPH6 170 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 EMC3Q9P0I2 261 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF581Q9P0T4 197 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 GPR160Q9UJ42 338 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ANKRD30BLA7E2S9 258 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF732B4DXR9 585 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ACKR3P25106 362 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ADH6P28332 368 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PTGS2P35354 604 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 MEOX1P50221 254 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PIGPP57054 158 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 VAMP2P63027 116 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ALKBH6Q3KRA9 238 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 BEND4Q6ZU67 534 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 SLC51BQ86UW2 128 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 INTS12Q96CB8 462 aaKnown RBP9.88□□□□□ -0.83
TOP3A-217ENST00000584582 IGF2RP11717 2491 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PLCE1Q9P212 2302 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 MPTX1A8MV57 137 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 IGHEP01854 428 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PRKACBP22694 351 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 OR2B11Q5JQS5 317 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 C5orf24Q7Z6I8 188 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 PAQR4Q8N4S7 273 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-217ENST00000584582 FGFBP3Q8TAT2 258 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 ST8SIA2Q92186 375 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 TRIB1Q96RU8 372 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 WDR13Q9H1Z4 485 aa9.88□□□□□ -0.83
TOP3A-217ENST00000584582 CACNA1BQ00975 2339 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 IGKV1-9A0A0C4DH69 117 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 SULT1C2O00338 296 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 GABRA1P14867 456 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 FABP6P51161 128 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 RAB32Q13637 225 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 AANATQ16613 207 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 OIT3Q8WWZ8 545 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 WNT2BQ93097 391 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 CPNE4Q96A23 557 aaPredicted RBP9.87□□□□□ -0.83
TOP3A-217ENST00000584582 PIPOXQ9P0Z9 390 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 ATRXP46100 2492 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 KLRC4-KLRK1H3BQV0 150 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 NGFP01138 241 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 HPNP05981 417 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 CA6P23280 308 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 TMEM50BP56557 158 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 TAS2R31P59538 309 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 DEFB109BQ30KR1 87 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 CLEC18BQ6UXF7 455 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 PP6455Q8WZ26 134 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 PSMF1Q92530 271 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 TMEM265A0A087WTH1 108 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 F8W036 122 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 H3BP45 60 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 NKX2-8O15522 239 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 SELEP16581 610 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 BLOC1S1P78537 153 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 ENDOGQ14249 297 aaKnown RBP9.87□□□□□ -0.83
TOP3A-217ENST00000584582 TMEM128Q5BJH2 165 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 C11orf87Q6NUJ2 197 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF695Q8IW36 515 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 OR2M7Q8NG81 312 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 OR14K1Q8NGZ2 314 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 FAM173AQ9BQD7 235 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 PECRQ9BY49 303 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF286AQ9HBT8 521 aa9.87□□□□□ -0.83
TOP3A-217ENST00000584582 ADAMTS9Q9P2N4 1935 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 SIRPB1O00241 398 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 GSTP1P09211 210 aaKnown RBP9.86□□□□□ -0.83
TOP3A-217ENST00000584582 FKBP2P26885 142 aaKnown RBP9.86□□□□□ -0.83
TOP3A-217ENST00000584582 GSK3AP49840 483 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 Q0VFX4 171 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 COL19A1Q14993 1142 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 ZNF385CQ66K41 422 aaPredicted RBP9.86□□□□□ -0.83
TOP3A-217ENST00000584582 FDX2Q6P4F2 183 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 TMEM88Q6PEY1 159 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 DRAM2Q6UX65 266 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 OSR2Q8N2R0 312 aa9.86□□□□□ -0.83
TOP3A-217ENST00000584582 SPICQ8N5J4 248 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms