RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ACTC1P68032 377 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ACTA1P68133 377 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF91Q05481 1191 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 UBE2V2Q15819 145 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 DEFB112Q30KQ8 113 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 C12orf54Q6X4T0 127 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 VMO1Q7Z5L0 202 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ANGPTL5Q86XS5 388 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 CALHM1Q8IU99 346 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 BATF2Q8N1L9 274 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ACBD7Q8N6N7 88 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 POC1AQ8NBT0 407 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ZNRF1Q8ND25 227 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 OR2G2Q8NGZ5 317 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 NPRL2Q8WTW4 380 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 H1FXQ92522 213 aaKnown RBP10.63□□□□□ -0.71
HDAC1-209ENST00000484305 LHX4Q969G2 390 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ADI1Q9BV57 179 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 AMBNQ9NP70 447 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 RASL12Q9NYN1 266 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 FRRS1LQ9P0K9 344 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ONECUT1Q9UBC0 465 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF222Q9UK12 451 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 MYRFQ9Y2G1 1151 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 MAB21L2Q9Y586 359 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 PCDHGB1Q9Y5G3 927 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 FAM230AA0A1W2PPH8 454 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 RFPL4AA6NLU0 287 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 SNTNA6NMZ2 147 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 RFPL4AL1F8VTS6 287 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 J3QLW9 94 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 MPZL2O60487 215 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 UBCP0CG48 685 aaKnown RBP10.62□□□□□ -0.71
HDAC1-209ENST00000484305 DBTP11182 482 aaKnown RBP10.62□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF19P17023 458 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 NDUFB7P17568 137 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 MPZP25189 248 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 COMPP49747 757 aaPredicted RBP10.62□□□□□ -0.71
HDAC1-209ENST00000484305 CAV3P56539 151 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 BPIFB3P59826 476 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 PDCD1Q15116 288 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 FDX2Q6P4F2 183 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 LHFPL3Q86UP9 236 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 PDZD9Q8IXQ8 264 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 CD177Q8N6Q3 437 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 C8orf46Q8TAG6 207 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 STMN2Q93045 179 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 CHST5Q9GZS9 411 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 PRDM13Q9H4Q3 707 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 ELL3Q9HB65 397 aaPredicted RBP10.62□□□□□ -0.71
HDAC1-209ENST00000484305 POLDIP2Q9Y2S7 368 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 KPTNQ9Y664 436 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 FBN3Q75N90 2809 aa10.62□□□□□ -0.71
HDAC1-209ENST00000484305 ANK2Q01484 3957 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 CLDN34H7C241 214 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 HOXA3O43365 443 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 NOS1APO75052 506 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 NXPH2O95156 264 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 RNASE1P07998 156 aaKnown RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 HTR1AP08908 422 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 CFPP27918 469 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 CEBPDP49716 269 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 DLX1P56177 255 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 ERVK11-1P61568 191 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 PRB3Q04118 309 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 ZSCAN26Q16670 478 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 Q8N7P7 452 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 CCDC54Q8NEL0 328 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 TMEM185AQ8NFB2 350 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 APH1BQ8WW43 257 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 GATAD2BQ8WXI9 593 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 SLC25A28Q96A46 364 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 ADAT3Q96EY9 351 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 PELI1Q96FA3 418 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 SDSLQ96GA7 329 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 C4orf36Q96KX1 117 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 DMRTB1Q96MA1 342 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 Q96MT0 163 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 NRIP2Q9BQI9 281 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF649Q9BS31 505 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 ISG20L2Q9H9L3 353 aaKnown RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 ZMAT3Q9HA38 289 aaKnown RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 HES4Q9HCC6 221 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 SIRT7Q9NRC8 400 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-209ENST00000484305 SLC7A11Q9UPY5 501 aa10.61□□□□□ -0.71
HDAC1-209ENST00000484305 WBP4O75554 376 aaKnown RBP10.6□□□□□ -0.71
HDAC1-209ENST00000484305 GATBO75879 557 aaKnown RBP10.6□□□□□ -0.71
HDAC1-209ENST00000484305 IGHA1P01876 353 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 ISG15P05161 165 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 PRDX2P32119 198 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 FUT6P51993 359 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 ACTA2P62736 377 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 ACTG2P63267 376 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms