RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MTCP1P56278 107 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 SLC16A13Q7RTY0 426 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 PPP1R3BQ86XI6 285 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 SMIM8Q96KF7 97 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 NAA11Q9BSU3 229 aaPredicted RBP17.35■□□□□ 0.37
CRLF3-201ENST00000324238 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.35■□□□□ 0.37
CRLF3-201ENST00000324238 CCDC163A0A0D9SF12 145 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 LYZL2Q7Z4W2 148 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 OR11L1Q8NGX0 322 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 MARS2Q96GW9 593 aaKnown RBP17.35■□□□□ 0.37
CRLF3-201ENST00000324238 CCDC74BQ96LY2 380 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 SH3BGRL3Q9H299 93 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 ANAPC10Q9UM13 185 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 CSNK1A1P48729 337 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 PIGPP57054 158 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 TAS2R46P59540 309 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 ECH1Q13011 328 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 OR5L1Q8NGL2 311 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 EMG1Q92979 244 aaKnown RBP17.34■□□□□ 0.37
CRLF3-201ENST00000324238 KIRREL1Q96J84 757 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 COA4Q9NYJ1 87 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 IGHV5-10-1A0A0J9YXX1 117 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 FCGR3AP08637 254 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 OR5H8P0DN80 308 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 HOXA1P49639 335 aaPredicted RBP17.34■□□□□ 0.37
CRLF3-201ENST00000324238 ACTBL2Q562R1 376 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 RAET1LQ5VY80 246 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 IL34Q6ZMJ4 242 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 FAM89BQ8N5H3 189 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 HSD17B11Q8NBQ5 300 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 OR6S1Q8NH40 331 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 SLC25A43Q8WUT9 341 aaPredicted RBP17.34■□□□□ 0.37
CRLF3-201ENST00000324238 DOCK7Q96N67 2140 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 ARPC4-TTLL3A0A0A6YYG9 625 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 A0A1W2PPE3 182 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 NPIPB13A6NJU9 1138 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 COLCA2A8K830 154 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 NPIPB4C9JG80 1138 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 ZFAND5O76080 213 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 CFIP05156 583 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 ENDOGQ14249 297 aaKnown RBP17.34■□□□□ 0.37
CRLF3-201ENST00000324238 SWI5Q1ZZU3 235 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 SSC4DQ8WTU2 575 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 SPSB2Q99619 263 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 RSRP1Q9BUV0 290 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 MOB1AQ9H8S9 216 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 BIN3Q9NQY0 253 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 PADI1Q9ULC6 663 aa17.34■□□□□ 0.37
CRLF3-201ENST00000324238 CEACAM18A8MTB9 384 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 EIF3GO75821 320 aaKnown RBP eCLIP17.33■□□□□ 0.37
CRLF3-201ENST00000324238 OR5AC1P0C628 307 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 PIGYQ3MUY2 71 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 KRBOX4Q5JUW0 171 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 WDR74Q6RFH5 385 aaPredicted RBP17.33■□□□□ 0.37
CRLF3-201ENST00000324238 SGPP2Q8IWX5 399 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 SFT2D1Q8WV19 159 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 PRRX2Q99811 253 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 WFDC1Q9HC57 220 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 WNT16Q9UBV4 365 aa17.33■□□□□ 0.37
CRLF3-201ENST00000324238 MRPS17Q9Y2R5 130 aaKnown RBP17.33■□□□□ 0.37
CRLF3-201ENST00000324238 KLF2Q9Y5W3 355 aaPredicted RBP17.33■□□□□ 0.37
CRLF3-201ENST00000324238 M0R036 132 aa17.33■□□□□ 0.36
CRLF3-201ENST00000324238 CXCL12P48061 93 aa17.33■□□□□ 0.36
CRLF3-201ENST00000324238 SUMO3P55854 103 aaPredicted RBP17.33■□□□□ 0.36
CRLF3-201ENST00000324238 MIDNQ504T8 468 aa17.33■□□□□ 0.36
CRLF3-201ENST00000324238 SCGB3A2Q96PL1 93 aa17.33■□□□□ 0.36
CRLF3-201ENST00000324238 AK3Q9UIJ7 227 aa17.33■□□□□ 0.36
CRLF3-201ENST00000324238 LOC400499M0QZD8 3231 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 FIGNL2A6NMB9 653 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 M0R135 149 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 ITGA3P26006 1051 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 BTNL8Q6UX41 500 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 NANPQ8TBE9 248 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 ZNF799Q96GE5 643 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 C1orf123Q9NWV4 160 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 EXPH5Q8NEV8 1989 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 NXPH3O95157 252 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 MBPP02686 304 aaPredicted RBP17.32■□□□□ 0.36
CRLF3-201ENST00000324238 ARG1P05089 322 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 MSR1P21757 451 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 NHLH2Q02577 135 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 HGFACQ04756 655 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 RPUSD3Q6P087 351 aaKnown RBP17.32■□□□□ 0.36
CRLF3-201ENST00000324238 SUMF1Q8NBK3 374 aa17.32■□□□□ 0.36
CRLF3-201ENST00000324238 SPACA9Q96E40 222 aaPredicted RBP17.32■□□□□ 0.36
CRLF3-201ENST00000324238 EIF5A2Q9GZV4 153 aaKnown RBP17.32■□□□□ 0.36
CRLF3-201ENST00000324238 IGKV1-27A0A075B6S5 117 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 A6NLC8 198 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 FOXI3A8MTJ6 420 aaPredicted RBP17.31■□□□□ 0.36
CRLF3-201ENST00000324238 PATE3B3GLJ2 98 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 DHRS3O75911 302 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 LYL1P12980 280 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 HABP2Q14520 560 aaPredicted RBP17.31■□□□□ 0.36
CRLF3-201ENST00000324238 OR52M1Q8NGK5 317 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 OR5L2Q8NGL0 311 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 SGK3Q96BR1 496 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 AQP7P3A6NL99 342 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 NAT2P11245 290 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 CCL4P13236 92 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 PRF1P14222 555 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms