RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ST6GALNAC3Q8NDV1 305 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 ARHGAP5-AS1Q96IT6 56 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 Q96M66 194 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 ELOVL5Q9NYP7 299 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 NPAP1Q9NZP6 1156 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 KCNK7Q9Y2U2 307 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 M0R1B8 84 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 GSTP1P09211 210 aaKnown RBP19.57■□□□□ 0.72
PTX3-201ENST00000295927 GTF2F2P13984 249 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 HAAOP46952 286 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 TMEM211Q6ICI0 200 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 FAAP20Q6NZ36 180 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 SLC25A26Q70HW3 274 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 NUDCD2Q8WVJ2 157 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 BCL2L14Q9BZR8 327 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 MEMO1Q9Y316 297 aa19.57■□□□□ 0.72
PTX3-201ENST00000295927 ESPL1Q14674 2120 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 SPTA1P02549 2419 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 IQCF6A8MYZ5 107 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 SFTPBP07988 381 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 TUBG1P23258 451 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 BLVRBP30043 206 aaPredicted RBP19.56■□□□□ 0.72
PTX3-201ENST00000295927 CCKARP32238 428 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 C3orf36Q3SXR2 165 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 SFRP4Q6FHJ7 346 aaPredicted RBP19.56■□□□□ 0.72
PTX3-201ENST00000295927 TRAPPC6BQ86SZ2 158 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 CREB3L1Q96BA8 519 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 CYYR1Q96J86 154 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 NEURL2Q9BR09 285 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 TUBG2Q9NRH3 451 aa19.56■□□□□ 0.72
PTX3-201ENST00000295927 ATRXP46100 2492 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 A0A0B4J293 547 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 MFNGO00587 321 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 TCRBP04435 133 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 SELEP16581 610 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 CASP6P55212 293 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 C22orf34Q6ZV56 151 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 DEDD2Q8WXF8 326 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 MCUBQ9NWR8 336 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 OR5B21A6NL26 309 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 GABRR1P24046 479 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 C1QTNF12Q5T7M4 302 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 COPZ2Q9P299 210 aa19.55■□□□□ 0.72
PTX3-201ENST00000295927 INMT-MINDY4F8WBC2 141 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 C16orf97H3BN30 126 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 SSX5O60225 188 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 CD3DP04234 171 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 CA7P43166 264 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 GNG3P63215 75 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 OSR2Q8N2R0 312 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 TMEM229BQ8NBD8 167 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 OR4C16Q8NGL9 310 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 OR8S1Q8NH09 359 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 PCDHB16Q9NRJ7 776 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 NUBP2Q9Y5Y2 271 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 PCNX1Q96RV3 2341 aa19.54■□□□□ 0.72
PTX3-201ENST00000295927 AKAIN1P0CW23 69 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 FAUP35544 74 aaKnown RBP19.53■□□□□ 0.72
PTX3-201ENST00000295927 NPBWR2P48146 333 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 GNG2P59768 71 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 PNLIPRP3Q17RR3 467 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 AGAP6Q5VW22 663 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 SAXO1Q8IYX7 474 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 OR4D10Q8NGI6 311 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 MRPS24Q96EL2 167 aaKnown RBP19.53■□□□□ 0.72
PTX3-201ENST00000295927 PECRQ9BY49 303 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTX3-201ENST00000295927 NUDT15Q9NV35 164 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 TRAV6A0A075B6T7 132 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 CYB5AP00167 134 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 RAB25P57735 213 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 TAS2R19P59542 299 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 IGFBP7Q16270 282 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 TAF9Q16594 264 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 ZNF718Q3SXZ3 478 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 STEAP1BQ6NZ63 245 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 C1orf174Q8IYL3 243 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 FBXL14Q8N1E6 418 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 SLAMF9Q96A28 289 aa19.53■□□□□ 0.72
PTX3-201ENST00000295927 USB1Q9BQ65 265 aaKnown RBP19.53■□□□□ 0.72
PTX3-201ENST00000295927 PURGQ9UJV8 347 aaKnown RBP19.53■□□□□ 0.72
PTX3-201ENST00000295927 RCVRNP35243 200 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 FABP6P51161 128 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 TATDN3Q17R31 274 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 PIGYQ3MUY2 71 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 SEZ6L2Q6UXD5 910 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 BTN2A1Q7KYR7 527 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 TMEM200AQ86VY9 491 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 ZNF573Q86YE8 665 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 BATF2Q8N1L9 274 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 GVQW1Q8N7I0 195 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 RTL8AQ9BWD3 113 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 ZNF107Q9UII5 783 aaPredicted RBP19.52■□□□□ 0.72
PTX3-201ENST00000295927 FZR1Q9UM11 496 aa19.52■□□□□ 0.72
PTX3-201ENST00000295927 CRYAAP02489 173 aa19.51■□□□□ 0.71
PTX3-201ENST00000295927 BCL3P20749 454 aa19.51■□□□□ 0.71
PTX3-201ENST00000295927 BTG1P62324 171 aa19.51■□□□□ 0.71
PTX3-201ENST00000295927 SIGIRRQ6IA17 410 aa19.51■□□□□ 0.71
PTX3-201ENST00000295927 HAGHLQ6PII5 290 aaPredicted RBP19.51■□□□□ 0.71
PTX3-201ENST00000295927 ZNF554Q86TJ5 538 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms