RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 GUK1Q16774 197 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 TMEM176BQ3YBM2 270 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-201ENST00000262395 PHLDA2Q53GA4 152 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 ZNF160Q9HCG1 818 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 SDHAF3Q9NRP4 125 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 NXT1Q9UKK6 140 aaKnown RBP15.74■□□□□ 0.11
TRAF4-201ENST00000262395 JTBO76095 146 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 ZNF43P17038 809 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 ACKR3P25106 362 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 SLC38A9Q8NBW4 561 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 INTS12Q96CB8 462 aaKnown RBP15.74■□□□□ 0.11
TRAF4-201ENST00000262395 MVB12AQ96EY5 273 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 METTL7AQ9H8H3 244 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 RNF122Q9H9V4 155 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 MSTNO14793 375 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 IFNA21P01568 189 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 MBPP02686 304 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-201ENST00000262395 S100A8P05109 93 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 THBS4P35443 961 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 CAMLGP49069 296 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 PDCD1Q15116 288 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 LYZL2Q7Z4W2 148 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 FAM89BQ8N5H3 189 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 PADI1Q9ULC6 663 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 PIGLQ9Y2B2 252 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
TRAF4-201ENST00000262395 VPS13AQ96RL7 3174 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 IGHV1OR21-1A0A087WYE8 117 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 IGHV3-15A0A0B4J1V0 119 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 ZNF726A6NNF4 738 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 SPRY1O43609 319 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-201ENST00000262395 CLDN17P56750 224 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 PIGPP57054 158 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 TAF9Q16594 264 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 OGFOD3Q6PK18 319 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 BATF2Q8N1L9 274 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 MRPL38Q96DV4 380 aaKnown RBP15.73■□□□□ 0.11
TRAF4-201ENST00000262395 MOB1AQ9H8S9 216 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 KPTNQ9Y664 436 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 C10orf142B7Z368 130 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 SNCAP37840 140 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 CSNK1EP49674 416 aaKnown RBP15.73■□□□□ 0.11
TRAF4-201ENST00000262395 CEBPGP53567 150 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 NHLH2Q02577 135 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 PRAMEF20Q5VT98 475 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 TMEM156Q8N614 296 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 CHRDQ9H2X0 955 aa15.73■□□□□ 0.11
TRAF4-201ENST00000262395 ZNF850A8MQ14 1090 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 MASP2O00187 686 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 OR5AC1P0C628 307 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 PLPPR5Q32ZL2 321 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 SLC25A47Q6Q0C1 308 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 PLXDC2Q6UX71 529 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 OR51M1Q9H341 326 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 GPR173Q9NS66 373 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 SHANK1Q9Y566 2161 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 UMAD1C9J7I0 102 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 OR5H8P0DN80 308 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 S100PP25815 95 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 NCMAPQ5T1S8 102 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 OR5L1Q8NGL2 311 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 RHBDD1Q8TEB9 315 aa15.72■□□□□ 0.11
TRAF4-201ENST00000262395 WDR77Q9BQA1 342 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-201ENST00000262395 FAM212BQ9NTI7 297 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-201ENST00000262395 OR2J2O76002 312 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 HEXBP07686 556 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 FOLR2P14207 255 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 C9orf152Q5JTZ5 239 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 ACER2Q5QJU3 275 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 OR2AE1Q8NHA4 323 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 SSC4DQ8WTU2 575 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 C8orf33Q9H7E9 229 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-201ENST00000262395 FOXI3A8MTJ6 420 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-201ENST00000262395 SLC33A1O00400 549 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-201ENST00000262395 UBE2CO00762 179 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 MT-ND4LP03901 98 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 PNLIPP16233 465 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 PHYHD1Q5SRE7 291 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 OPN5Q6U736 354 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 ANKRD37Q7Z713 158 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 ZNF561Q8N587 486 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 OR52M1Q8NGK5 317 aa15.71■□□□□ 0.11
TRAF4-201ENST00000262395 IGHV1OR15-9A0A0B4J2B8 117 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 A0A1W2PNV4 684 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 FAM230AA0A1W2PPH8 454 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 NPIPB13A6NJU9 1138 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 NPIPB4C9JG80 1138 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 RAB5AP20339 215 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 PPP1CCP36873 323 aaKnown RBP15.71■□□□□ 0.1
TRAF4-201ENST00000262395 OR11L1Q8NGX0 322 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 AKR7LQ8NHP1 331 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 PAPOLGQ9BWT3 736 aaKnown RBP15.71■□□□□ 0.1
TRAF4-201ENST00000262395 EGLN1Q9GZT9 426 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 STARD10Q9Y365 291 aa15.71■□□□□ 0.1
TRAF4-201ENST00000262395 PUS1Q9Y606 427 aaKnown RBP eCLIP15.71■□□□□ 0.1
TRAF4-201ENST00000262395 CRYM-AS1A6NIL9 109 aa15.7■□□□□ 0.1
TRAF4-201ENST00000262395 TIAF1O95411 115 aa15.7■□□□□ 0.1
TRAF4-201ENST00000262395 TMEM182Q6ZP80 229 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-201ENST00000262395 TSTD1Q8NFU3 115 aa15.7■□□□□ 0.1
TRAF4-201ENST00000262395 RARRES2Q99969 163 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms