RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CHCHD3Q9NX63 227 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 ERVK-18Q9QC07 812 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 RRP15Q9Y3B9 282 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 SVEP1Q4LDE5 3571 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 IGHV3OR15-7A0A075B7D8 119 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 A8MXK9 166 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 RHBDL1O75783 438 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 C21orf33P30042 268 aaPredicted RBP18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 MED21Q13503 144 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 KCNJ8Q15842 424 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 FAM120AOSQ5T036 256 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 AQP3Q92482 292 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 FGGYQ96C11 551 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 SEH1LQ96EE3 360 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 NEIL1Q96FI4 390 aaPredicted RBP18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 PDCD1LG2Q9BQ51 273 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 BABAM2Q9NXR7 383 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 CDC42EP3Q9UKI2 254 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 LRCH1Q9Y2L9 728 aa18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 POLR3KQ9Y2Y1 108 aaPredicted RBP18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 SIRT4Q9Y6E7 314 aaPredicted RBP18.97■□□□□ 0.63
SFSWAP-204ENST00000535399 SLC1A7O00341 560 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 GATBO75879 557 aaKnown RBP18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 GYPAP02724 150 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 CDK5R1Q15078 307 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 CCDC58Q4VC31 144 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 ESCO2Q56NI9 601 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 RPL22L1Q6P5R6 122 aaKnown RBP18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 HAGHLQ6PII5 290 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 STX19Q8N4C7 294 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 OR8B3Q8NGG8 313 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 OR5AK2Q8NH90 309 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 GATAD2BQ8WXI9 593 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 PP6455Q8WZ26 134 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 POM121Q96HA1 1249 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 OR8B2Q96RD0 313 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 WDR13Q9H1Z4 485 aa18.96■□□□□ 0.63
SFSWAP-204ENST00000535399 TRBV2A0A0J9YWF9 115 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 OGG1O15527 345 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 PHF1O43189 567 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 AKR7A2O43488 359 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 LALBAP00709 142 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 SERPINA3P01011 423 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 MUC1P15941 1255 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 PCMT1P22061 227 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 VHLP40337 213 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 ZNF841Q6ZN19 808 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 IL17RELQ6ZVW7 336 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 UTS2BQ765I0 119 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 ZNF573Q86YE8 665 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 OR13C3Q8NGS6 347 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 TRMT10AQ8TBZ6 339 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 TECTBQ96PL2 329 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 SSBP3Q9BWW4 388 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 COMMD4Q9H0A8 199 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 SHARPINQ9H0F6 387 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 CTSZQ9UBR2 303 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 LPAR3Q9UBY5 353 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 SLC7A11Q9UPY5 501 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 JMJD1CQ15652 2540 aa18.95■□□□□ 0.62
SFSWAP-204ENST00000535399 PPIAL4CA0A0B4J2A2 164 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 IGKV1-9A0A0C4DH69 117 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 J3QT63 122 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 NDUFA2O43678 99 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 RPSAP08865 295 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 ZNF20P17024 532 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 HAAOP46952 286 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 PITPNBP48739 271 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 GMFBP60983 142 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 MICBQ29980 383 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 CHRFAM7AQ494W8 412 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 NLRC3Q7RTR2 1065 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 ZNF671Q8TAW3 534 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 NPRL2Q8WTW4 380 aa18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 RGP1Q92546 391 aaPredicted RBP18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 C12orf43Q96C57 262 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-204ENST00000535399 FAM230AA0A1W2PPH8 454 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 TRAPPC2LH3BP13 241 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 ADAM20O43506 726 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 SYNGR1O43759 233 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 CDK1P06493 297 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 FUT6P51993 359 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 WDR25Q64LD2 544 aaPredicted RBP18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 ANGPTL5Q86XS5 388 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 SGCDQ92629 289 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 BEX2Q9BXY8 128 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 MMP26Q9NRE1 261 aa18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 PAK1IP1Q9NWT1 392 aaPredicted RBP18.93■□□□□ 0.62
SFSWAP-204ENST00000535399 IGKV1-27A0A075B6S5 117 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 A0A0G2JMP0 313 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 A0A0X1KG70 313 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 PTGES3LE9PB15 166 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 ATF1P18846 271 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 AMY2BP19961 511 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 MPZP25189 248 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 GNB2P62879 340 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 PAX2Q02962 417 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 DOC2BQ14184 412 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 CNN3Q15417 329 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 DCAF12L2Q5VW00 463 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms