RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	TRIM64C	A6NLI5	447 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	POM121C	A8CG34	1229 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525		F5H5P2	479 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525		J3QLW9	94 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	SPRY3	O43610	288 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	SULT1B1	O43704	296 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF780A	O75290	641 aa	Predicted RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	RBP4	P02753	201 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CSN2	P05814	226 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	PGA5	P0DJD9	388 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CPE	P16870	476 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF19	P17023	458 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	IGFBP3	P17936	291 aa	Predicted RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ANOS1	P23352	680 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	COL8A2	P25067	703 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	C21orf33	P30042	268 aa	Predicted RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ETV1	P50549	477 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	PSMD7	P51665	324 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	DOC2B	Q14184	412 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF146	Q15072	292 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	MICB	Q29980	383 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	SMIM21	Q3B7S5	101 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	TP53I3	Q53FA7	332 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	C6orf52	Q5T4I8	152 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	UBE2U	Q5VVX9	321 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	OTP	Q5XKR4	325 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CD276	Q5ZPR3	534 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	METAP1D	Q6UB28	335 aa	Predicted RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ASCL4	Q6XD76	172 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	AHSA2	Q719I0	299 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF367	Q7RTV3	350 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	LINC00596	Q86U02	117 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	LHFPL3	Q86UP9	236 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CALHM1	Q8IU99	346 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	MKX	Q8IYA7	352 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	LINC01356	Q8N9X3	169 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	POC1A	Q8NBT0	407 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CHST4	Q8NCG5	386 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR10AD1	Q8NGE0	317 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR51F2	Q8NH61	342 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CLDND2	Q8NHS1	167 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	TBC1D15	Q8TC07	691 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ITLN1	Q8WWA0	313 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	AQP3	Q92482	292 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CCL17	Q92583	94 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	SDSL	Q96GA7	329 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	NRIP2	Q9BQI9	281 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	UQCC2	Q9BRT2	126 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	SOX7	Q9BT81	388 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR51B6	Q9H340	312 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	IFT22	Q9H7X7	185 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ISG20L2	Q9H9L3	353 aa	Known RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMEM165	Q9HC07	324 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	AMBN	Q9NP70	447 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMEM138	Q9NPI0	162 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ACOT13	Q9NPJ3	140 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	PCDHB16	Q9NRJ7	776 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	CDC42EP3	Q9UKI2	254 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	FZR1	Q9UM11	496 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	SLC7A11	Q9UPY5	501 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	PPIAL4A	Q9Y536	164 aa		4.27	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZFHX3	Q15911	3703 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	TRBV5-7	A0A0A0MS05	114 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	TRBV23-1	A0A0A0MS06	115 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A0A6YYJ9	748 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	IGHV4-61	A0A0C4DH41	118 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	C5orf63	A6NC05	138 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A10P	A6NDY2	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A18P	A6NE21	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A16P	A6NEW6	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A20P	A6NIJ5	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A8P	A6NJQ4	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A7P	A6NKC0	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF850	A8MQ14	1090 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A22P	A8MWA6	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A12P	A8MX19	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A5P	A8MXJ8	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A23P	A8MXZ1	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF879	B4DU55	563 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525		H7C1Q1	480 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	P2RY10	O00398	339 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	PPIH	O43447	177 aa	Known RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	AKR7A2	O43488	359 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	XPNPEP2	O43895	674 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ARL6IP5	O75915	188 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	KDM4B	O94953	1096 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	TNFAIP8	O95379	198 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	KNG1	P01042	644 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	HLA-DPB1	P04440	258 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	GLA	P06280	429 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	MSMB	P08118	114 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	WNT2	P09544	360 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A15P	P0C7V4	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A13P	P0C7W8	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A14P	P0C7W9	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM90A24P	P0C7X0	464 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	UBB	P0CG47	229 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms