RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CD300LFQ8TDQ1 290 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 EGLN1Q9GZT9 426 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 EDARQ9UNE0 448 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 ICE1Q9Y2F5 2266 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 HSD17B6O14756 317 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 NDUFB6O95139 128 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 CD1AP06126 327 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 UMODP07911 640 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 RPA2P15927 270 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 MSMO1Q15800 293 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 ARRDC1Q8N5I2 433 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 RTN4RQ9BZR6 473 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 A0A0B4J2A0 478 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 LRRC30A6NM36 301 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 GLAP06280 429 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 OMGP23515 440 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF169Q14929 603 aaPredicted RBP12.77□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF528Q3MIS6 628 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 C6orf201Q7Z4U5 140 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 UPRTQ96BW1 309 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 MARVELD1Q9BSK0 173 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 GLRX2Q9NS18 164 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.36
TCOF1-202ENST00000377797 GPR137BO60478 399 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 CDC14BO60729 498 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 INHBBP09529 407 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 MPGP29372 298 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 ABHD5Q8WTS1 349 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 EXTL1Q92935 676 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 RAB39BQ96DA2 213 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 SLC23A1Q9UHI7 598 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 PLA2G10O15496 165 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 GSK3AP49840 483 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 AKR1C8PQ5T2L2 129 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 FGF11Q92914 225 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 A0A1W2PNV4 684 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 WDR1O75083 606 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 TMIGD3P0DMS9 266 aaPredicted RBP12.77□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF239Q16600 458 aaKnown RBP12.77□□□□□ -0.37
TCOF1-202ENST00000377797 SLC25A47Q6Q0C1 308 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 TMEM200AQ86VY9 491 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 TMEM185AQ8NFB2 350 aa12.77□□□□□ -0.37
TCOF1-202ENST00000377797 ADAT1Q9BUB4 502 aaKnown RBP12.77□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF230Q9UIE0 474 aaPredicted RBP12.77□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF354AO60765 605 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 SLC6A1P30531 599 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 OR4D6Q8NGJ1 314 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 FAAP24Q9BTP7 215 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 TERTO14746 1132 aaKnown RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 AGPAT2O15120 278 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 CRYZL1O95825 349 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 TSPAN15O95858 294 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 SERPINF1P36955 418 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF468Q5VIY5 522 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF610Q8N9Z0 462 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 SLC25A31Q9H0C2 315 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 NTN3O00634 580 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 GMDSO60547 372 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 GABRA1P14867 456 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 HIKESHIQ53FT3 197 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 TIPARPQ7Z3E1 657 aaKnown RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 LRRTM1Q86UE6 522 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 GVQW1Q8N7I0 195 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 H1FXQ92522 213 aaKnown RBP12.76□□□□□ -0.37
TCOF1-202ENST00000377797 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 IFNA17P01571 189 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 FBXW9Q5XUX1 488 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 HAS2Q92819 552 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
TCOF1-202ENST00000377797 ROS1P08922 2347 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 RAMP1O60894 148 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 NDUFB7P17568 137 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 SPINK2P20155 84 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 NFYBP25208 207 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 PLA2G7Q13093 441 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 ARPC5LQ9BPX5 153 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 FAM234AQ9H0X4 552 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
TCOF1-202ENST00000377797 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 RPS27AP62979 156 aaKnown RBP12.75□□□□□ -0.37
TCOF1-202ENST00000377797 UBA52P62987 128 aaKnown RBP12.75□□□□□ -0.37
TCOF1-202ENST00000377797 ZNRF4Q8WWF5 429 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 RIMS4Q9H426 269 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-202ENST00000377797 FZR1Q9UM11 496 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 ANKRD20A5PA0PJZ0 165 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 EFNB2P52799 333 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 KIF26BQ2KJY2 2108 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 PPP1CBP62140 327 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 CD300CQ08708 224 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 GLDNQ6ZMI3 551 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-202ENST00000377797 RTN4IP1Q8WWV3 396 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms