RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
SHKBP1-201ENST00000291842 TAS2R31P59538 309 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 SUPT4H1P63272 117 aaKnown RBP16■□□□□ 0.15
SHKBP1-201ENST00000291842 PSG4Q00888 419 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 TUSC1Q2TAM9 212 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 DRAM2Q6UX65 266 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 ACOT7LQ6ZUV0 252 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 SLC16A14Q7RTX9 510 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 PSMF1Q92530 271 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 ADGRG7Q96K78 797 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 FOXB1Q99853 325 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 CHMP1AQ9HD42 196 aaPredicted RBP16■□□□□ 0.15
SHKBP1-201ENST00000291842 NUP50Q9UKX7 468 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 CSAG2Q9Y5P2 127 aa16■□□□□ 0.15
SHKBP1-201ENST00000291842 BCL2L11O43521 198 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 OR2F2O95006 317 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 CST2P09228 141 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 CPT2P23786 658 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 CBX5P45973 191 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 UBA52P62987 128 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 OR2F1Q13607 317 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 CHRFAM7AQ494W8 412 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 UNQ6126/PRO20091Q6UXV3 157 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 GALNT11Q8NCW6 608 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 DNPH1O43598 174 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 SERPINA5P05154 406 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 SERPINA7P05543 415 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 MPLP40238 635 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 ZNF345Q14585 488 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 TAF9Q16594 264 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 ANKRD55Q3KP44 614 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 H3F3CQ6NXT2 135 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 BRICD5Q6PL45 260 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 SLC38A6Q8IZM9 456 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 INO80EQ8NBZ0 244 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 BHLHE23Q8NDY6 225 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 CPT1CQ8TCG5 803 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 CDC6Q99741 560 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 HES7Q9BYE0 225 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 PPA2Q9H2U2 334 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 FOXJ2Q9P0K8 574 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 LRFN1Q9P244 771 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 GPR160Q9UJ42 338 aa15.99■□□□□ 0.15
SHKBP1-201ENST00000291842 ARID1AO14497 2285 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 COL27A1Q8IZC6 1860 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 SFT2D2O95562 160 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 KNG1P01042 644 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 CRHP06850 196 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 FPR2P25090 351 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 PSMB6P28072 239 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 RIPPLY1Q0D2K3 151 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 Q6ZSR3 168 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 TMEM185AQ8NFB2 350 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 OR5AP2Q8NGF4 316 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 FAAP24Q9BTP7 215 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 TM2D1Q9BX74 207 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 OSGIN2Q9Y236 505 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 SESN1Q9Y6P5 492 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 DHRS7CA6NNS2 312 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 C9orf172C9J069 976 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 ZNF205O95201 554 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 CELA3AP09093 270 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 PGAM2P15259 253 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 RRADP55042 308 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 RSU1Q15404 277 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 C9orf135Q5VTT2 229 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 LHFPL1Q86WI0 220 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 TMEM17Q86X19 198 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 SKA3Q8IX90 412 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 DCUN1D4Q92564 292 aa15.98■□□□□ 0.15
SHKBP1-201ENST00000291842 SERPINE3A8MV23 424 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 F5H0A9 414 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 CSTBP04080 98 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 ZP3P21754 424 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 NUP62P37198 522 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 TAS2R46P59540 309 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 SCRN3Q0VDG4 424 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 FOXO1Q12778 655 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 ABLIM2Q6H8Q1 611 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 OVCH2Q7RTZ1 564 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 PXT1Q8NFP0 134 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 DYRK2Q92630 601 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 Q96M66 194 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 SIGLEC12Q96PQ1 595 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 WNT5BQ9H1J7 359 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 GPR35Q9HC97 309 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 MED9Q9NWA0 146 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 OR6C6A6NF89 314 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 MSTNO14793 375 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 GFRA1P56159 465 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 EIF3IQ13347 325 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 PEG10Q86TG7 708 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 SULF2Q8IWU5 870 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 BATF2Q8N1L9 274 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 STPG2Q8N412 459 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 BOLLQ8N9W6 283 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 C10orf35Q96D05 121 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 TAAR9Q96RI9 348 aa15.97■□□□□ 0.15
SHKBP1-201ENST00000291842 OR2H1Q9GZK4 316 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms