RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ODF3BA8MYP8 253 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 FAM220BPB1ANY3 271 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 APOC1P02654 83 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 ANXA2P07355 339 aaKnown RBP6.12□□□□□ -1.43
PDPN-205ENST00000487038 SLC2A1P11166 492 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 SLC6A6P31641 620 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 KDELR2P33947 212 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 MYCNOSP40205 109 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 SLC15A1P46059 708 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 PRKXP51817 358 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 GRB2P62993 217 aaKnown RBP6.12□□□□□ -1.43
PDPN-205ENST00000487038 SLC34A1Q06495 639 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 DYNC1I2Q13409 638 aaKnown RBP6.12□□□□□ -1.43
PDPN-205ENST00000487038 IL18R1Q13478 541 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 GFOD2Q3B7J2 385 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 ZNF626Q68DY1 528 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 NANOGP8Q6NSW7 305 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 TBPL2Q6SJ96 375 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 ETV3LQ6ZN32 361 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 DCXRQ7Z4W1 244 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 THAP5Q7Z6K1 395 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 DYNAPQ8N1N2 210 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 ZNF561Q8N587 486 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 RPL3LQ92901 407 aaKnown RBP6.12□□□□□ -1.43
PDPN-205ENST00000487038 SLAMF6Q96DU3 332 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 C1orf21Q9H246 121 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 LIN7BQ9HAP6 207 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 RYR1P21817 5038 aa6.12□□□□□ -1.43
PDPN-205ENST00000487038 IGKV1D-17A0A075B6S4 117 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 hCG_38984A0A1B0GV85 526 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PSMB11A5LHX3 300 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 UNC119BA6NIH7 251 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ARPC3O15145 178 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PTP4A3O75365 173 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 RHBDL1O75783 438 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 NPPAP01160 153 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 RBP4P02753 201 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 TFF1P04155 84 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 LPLP06858 475 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 SPARCP09486 303 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PGA5P0DJD9 388 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PSG2P11465 335 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 HIST1H1CP16403 213 aaKnown RBP6.11□□□□□ -1.43
PDPN-205ENST00000487038 CCL3L1P16619 93 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 BRS3P32247 399 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 CX3CR1P49238 355 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PRDX4Q13162 271 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 SMIM21Q3B7S5 101 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ABCA11PQ4W5N1 156 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 IFI44LQ53G44 452 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 FGD3Q5JSP0 725 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 C9orf66Q5T8R8 295 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 MINOS1Q5TGZ0 78 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZNF770Q6IQ21 691 aaPredicted RBP6.11□□□□□ -1.43
PDPN-205ENST00000487038 WDR93Q6P2C0 686 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZBTB49Q6ZSB9 765 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZDHHC23Q8IYP9 409 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 OSR2Q8N2R0 312 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 FAM86B1Q8N7N1 296 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PROKR2Q8NFJ6 384 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 OR2T12Q8NG77 320 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 OR11H6Q8NGC7 330 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 OR4K13Q8NH42 304 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZNF671Q8TAW3 534 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 SDSLQ96GA7 329 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 HIST1H2AAQ96QV6 131 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 PRR25Q96S07 402 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 IFT27Q9BW83 186 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 FN3KQ9H479 309 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 RGCCQ9H4X1 137 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZMAT4Q9H898 229 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 CENPMQ9NSP4 180 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZFP57Q9NU63 452 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 MRPL22Q9NWU5 206 aaKnown RBP6.11□□□□□ -1.43
PDPN-205ENST00000487038 GAR1Q9NY12 217 aaKnown RBP6.11□□□□□ -1.43
PDPN-205ENST00000487038 ZNF222Q9UK12 451 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 MINOS1-NBL1R4GNA1 71 aa6.11□□□□□ -1.43
PDPN-205ENST00000487038 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 HERC2O95714 4834 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 ZNF850A8MQ14 1090 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 C17orf98A8MV24 154 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 M0QZK8 103 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 FFAR1O14842 300 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 DNAJC8O75937 253 aaPredicted RBP6.1□□□□□ -1.43
PDPN-205ENST00000487038 JTBO76095 146 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 ZNF682O95780 498 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 H1F0P07305 194 aaKnown RBP6.1□□□□□ -1.43
PDPN-205ENST00000487038 ANOS1P23352 680 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 RPS27P42677 84 aaKnown RBP6.1□□□□□ -1.43
PDPN-205ENST00000487038 OMPP47874 163 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 CEBPDP49716 269 aaPredicted RBP6.1□□□□□ -1.43
PDPN-205ENST00000487038 GSK3AP49840 483 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 RAB25P57735 213 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 FXYD6P3P58550 94 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 RPL23AP62750 156 aaKnown RBP6.1□□□□□ -1.43
PDPN-205ENST00000487038 EIF2B1Q14232 305 aaKnown RBP6.1□□□□□ -1.43
PDPN-205ENST00000487038 ZNF273Q14593 569 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 TMEM200BQ69YZ2 307 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 LCN8Q6JVE9 175 aa6.1□□□□□ -1.43
PDPN-205ENST00000487038 PLBD1Q6P4A8 553 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms