RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 A6NLC8 198 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 DEDDO75618 318 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 JTBO76095 146 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 IFNA2P01563 188 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 GIMD1P0DJR0 217 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 FOSL2P15408 326 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 FBLP22087 321 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 CCL1P22362 96 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 C1orf189Q5VU69 101 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 SHISA6Q6ZSJ9 500 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 GALNTL5Q7Z4T8 443 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 LMX1AQ8TE12 382 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 ERGIC1Q969X5 290 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 ISOC2Q96AB3 205 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 MVB12AQ96EY5 273 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 PRRX2Q99811 253 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 ZNF251Q9BRH9 671 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 PECRQ9BY49 303 aa11.43□□□□□ -0.58
PDZRN3-205ENST00000466780 RTTNQ86VV8 2226 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 SDK1Q7Z5N4 2213 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 SNRNP70P08621 437 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 DAOP14920 347 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 RAB30Q15771 203 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 THEM4Q5T1C6 240 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 FAM57BQ71RH2 274 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 OR2AJ1Q8NGZ0 328 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 DDIT4LQ96D03 193 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 C1orf123Q9NWV4 160 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 ALKBH4Q9NXW9 302 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 TUBD1Q9UJT1 453 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 RPH3AQ9Y2J0 694 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 ASXL3Q9C0F0 2248 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 ADAMTS9Q9P2N4 1935 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 A0A1W2PNV4 684 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 A0A1W2PPC4 97 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 OPN1LWP04000 364 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 S100A6P06703 90 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 BLVRBP30043 206 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 RBMXP38159 391 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 RNF4P78317 190 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 FAM3AP98173 230 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 SURF2Q15527 256 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 ZNF561Q8N587 486 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 OR9K2Q8NGE7 335 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 THAP3Q8WTV1 239 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 NPRL2Q8WTW4 380 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 MRPL24Q96A35 216 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 LIN37Q96GY3 246 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 SHDQ96IW2 340 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 TPSD1Q9BZJ3 242 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 PISDQ9UG56 409 aa11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 C14orf166Q9Y224 244 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-205ENST00000466780 MYO7BQ6PIF6 2116 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 A0A1W2PPH5 198 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 NME2P1O60361 137 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 PGA4P0DJD7 388 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 PGA3P0DJD8 388 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 ACKR3P25106 362 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 SNCAP37840 140 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 CLRN1P58418 232 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 GABREP78334 506 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 C17orf67Q0P5P2 114 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 MIDNQ504T8 468 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 GGNBP1Q5YKI7 109 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 OPN5Q6U736 354 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 DTX1Q86Y01 620 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 NOXO1Q8NFA2 376 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 OR14K1Q8NGZ2 314 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 FNDC9Q8TBE3 224 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 NIT2Q9NQR4 276 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 LSM5Q9Y4Y9 91 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 EXPH5Q8NEV8 1989 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 MASP2O00187 686 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 S100A9P06702 114 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 LTBRP36941 435 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 POLR2GP62487 172 aaKnown RBP eCLIP11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 MYBPHQ13203 477 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 HMGN3Q15651 99 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 KISS1Q15726 138 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 FAM209BQ5JX69 171 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 CARD17Q5XLA6 110 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 LCN10Q6JVE6 187 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 UBAC2Q8NBM4 344 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 SEMA6DQ8NFY4 1073 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 TAAR9Q96RI9 348 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 C20orf24Q9BUV8 137 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 ARV1Q9H2C2 271 aa11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 MCTS1Q9ULC4 181 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-205ENST00000466780 hCG_1809904A0A1W2PP81 198 aa11.4□□□□□ -0.58
PDZRN3-205ENST00000466780 A0A1W2PR64 198 aa11.4□□□□□ -0.58
PDZRN3-205ENST00000466780 A0A1W2PRV1 198 aa11.4□□□□□ -0.58
PDZRN3-205ENST00000466780 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
PDZRN3-205ENST00000466780 DHRS7CA6NNS2 312 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms