RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PPICP45877 212 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PAX9P55771 341 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PFN3P60673 137 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ERVK-16P61578 105 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 AP1S1P61966 158 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SMAGPQ0VAQ4 97 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CLEC12BQ2HXU8 276 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ARHGAP11BQ3KRB8 267 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 LIN52Q52LA3 116 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SYT6Q5T7P8 510 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 C1orf195Q5TG92 126 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ZNF324BQ6AW86 544 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 BAIAP2L2Q6UXY1 529 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 RASSF6Q6ZTQ3 369 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PTAR1Q7Z6K3 402 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ZNF676Q8N7Q3 588 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 OR4F15Q8NGB8 312 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 OR10G3Q8NGC4 313 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 OR6T1Q8NGN1 323 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 OR13G1Q8NGZ3 307 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 AGAP11Q8TF27 550 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 YIPF5Q969M3 257 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 MED18Q9BUE0 208 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ZNF717Q9BY31 904 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 EBF2Q9HAK2 575 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ARMC1Q9NVT9 282 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 RBM22Q9NW64 420 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CALYQ9NYX4 217 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ANXA10Q9UJ72 324 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ZNF225Q9UK10 706 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 RAB22AQ9UL26 194 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SLC22A7Q9Y694 548 aa4.42□□□□□ -1.7
PTP4A1P1-201ENST00000420539 RFX7Q2KHR2 1363 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 TTC3P53804 2025 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 DHRS7CA6NNS2 312 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SYCE1LA8MT33 242 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 EVPLLA8MZ36 301 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 K7EQD1 137 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CHP2O43745 196 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SUPT3HO75486 399 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 NXPH4O95158 308 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SLC25A27O95847 323 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 GLUD1P00367 558 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 IGKV1D-16P01601 117 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SNRPCP09234 159 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PRKACGP22612 351 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 WARSP23381 471 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 F2RP25116 425 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 TSPOP30536 169 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CHRNB4P30926 498 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SERPINB5P36952 375 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 GCLMP48507 274 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PDLIM4P50479 330 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 BTN3A2P78410 334 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 BAXQ07812 192 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ZNF266Q14584 549 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PRSS8Q16651 343 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 NRF1Q16656 503 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 PYCR3Q53H96 274 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 TNFAIP8L2Q6P589 184 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 GLT6D1Q7Z4J2 308 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CARM1Q86X55 608 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CBR4Q8N4T8 237 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SLC26A10Q8NG04 563 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 OR13D1Q8NGV5 346 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 NT5CQ8TCD5 201 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SLC37A2Q8TED4 501 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SSC4DQ8WTU2 575 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 LZICQ8WZA0 190 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 CNRIP1Q96F85 164 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 KIR2DL4Q99706 377 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 AIF1LQ9BQI0 150 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 TAPBPLQ9BX59 468 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 OR11A1Q9GZK7 315 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 RBM38Q9H0Z9 239 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 VSIRQ9H7M9 311 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ZNF257Q9Y2Q1 563 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 LSM5Q9Y4Y9 91 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 TMEM56-RWDD3S4R434 201 aa4.41□□□□□ -1.7
PTP4A1P1-201ENST00000420539 A0A1W2PP64 1363 aa4.4□□□□□ -1.7
PTP4A1P1-201ENST00000420539 TDRD15B5MCY1 1934 aaKnown RBP4.4□□□□□ -1.7
PTP4A1P1-201ENST00000420539 ARHGEF10O15013 1369 aa4.4□□□□□ -1.7
PTP4A1P1-201ENST00000420539 IGHV4OR15-8A0A075B7B6 117 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 A0A087WUJ7 227 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 IGKV1D-13A0A0B4J2D9 117 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 A0A0G2JRQ6 117 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 SOCS2O14508 198 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 SLC31A2O15432 143 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 IGHG1P01857 330 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 HPNP05981 417 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 IGKV5-2P06315 115 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 SLC35G6P0C7Q6 338 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 IGKV1-13P0DP09 117 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 SNHG28P0DPA3 235 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 CD99P14209 185 aa4.4□□□□□ -1.71
PTP4A1P1-201ENST00000420539 AK4P27144 223 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms