RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 RFTN2Q52LD8 501 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 PRR30Q53SZ7 412 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 FHL5Q5TD97 284 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 OPN5Q6U736 354 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 SCIMPQ6UWF3 145 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 BTNL3Q6UXE8 466 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 HACD2Q6Y1H2 254 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 RTL4Q6ZR62 310 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 CYP4Z2PQ8N1L4 340 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 LRRC25Q8N386 305 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 CLIP4Q8N3C7 705 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 LIX1Q8N485 282 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 ZFP62Q8NB50 900 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 TMEM178AQ8NBL3 297 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 OR4Q3Q8NH05 313 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 C16orf52Q8NHV5 167 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 PPP3R2Q96LZ3 170 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 ATP5SQ99766 215 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 SYT4Q9H2B2 425 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 PIGUQ9H490 435 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 CLMPQ9H6B4 373 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 PLEKHA1Q9HB21 404 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 LRTM1Q9HBL6 345 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 RETNQ9HD89 108 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 MAT2BQ9NZL9 334 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 PURGQ9UJV8 347 aaKnown RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 PAIP2BQ9ULR5 123 aaKnown RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 KLF13Q9Y2Y9 288 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 POLR3HQ9Y535 204 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 ZNF780BQ9Y6R6 833 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 CACNA1DQ01668 2161 aa4.55□□□□□ -1.68
HMGB3P7-201ENST00000400214 hDV102S1A0JD36 115 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 H0YJX3 145 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ACOX3O15254 700 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 PFDN1O60925 122 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 FZD7O75084 574 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 LYPLA1O75608 230 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 TFAP2AP05549 437 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 FABP1P07148 127 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 NGFRP08138 427 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 KRT16P08779 473 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 PET100P0DJ07 73 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 EGR2P11161 476 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 BCKDHAP12694 445 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 NQO1P15559 274 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 HLA-GP17693 338 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 CFL1P23528 166 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 RPL3P39023 403 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 PPICP45877 212 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 EMDP50402 254 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 PAX2Q02962 417 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 EMX2Q04743 252 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 SRSF1Q07955 248 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 TSPAN31Q12999 210 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 CAPRIN1Q14444 709 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 KCNMB1Q16558 191 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 RPEL1Q2QD12 228 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ATP6AP1LQ52LC2 224 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 TRMT12Q53H54 448 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 PIK3CD-AS1Q5SR53 167 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 FNDC7Q5VTL7 733 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 THOC7Q6I9Y2 204 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ADAM5Q6NVV9 412 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ZNF836Q6ZNA1 936 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 C16orf47Q6ZP98 133 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 LINC00336Q6ZUF6 198 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 FAM57BQ71RH2 274 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 FCRLAQ7L513 359 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 GLCCI1Q86VQ1 547 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 RIMKLAQ8IXN7 391 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 OR2L13Q8N349 312 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 DHRSXQ8N5I4 330 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 TMEM156Q8N614 296 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 NATD1Q8N6N6 113 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 OR10V1Q8NGI7 309 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 OR52N5Q8NH56 324 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 MRAPQ8TCY5 172 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 IGFBPL1Q8WX77 278 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 DLX4Q92988 240 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 EXOSC8Q96B26 276 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 C4orf45Q96LM5 186 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ZFP3Q96NJ6 502 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 TIMP4Q99727 224 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 DCUN1D5Q9BTE7 237 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 EBPLQ9BY08 206 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 HES7Q9BYE0 225 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ACTR3CQ9C0K3 210 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 REEP4Q9H6H4 257 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 MIEF1Q9NQG6 463 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 ABCB10Q9NRK6 738 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 MRPS28Q9Y2Q9 187 aaKnown RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 CHCHD2Q9Y6H1 151 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 CDH10Q9Y6N8 788 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 KIAA1549Q9HCM3 1950 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 CELSR2Q9HCU4 2923 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 MAST4O15021 2626 aa4.54□□□□□ -1.68
HMGB3P7-201ENST00000400214 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms