RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MRPL3P09001 348 aaKnown RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 AKAIN1P0CW23 69 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 SLC2A1P11166 492 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF28P17035 718 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RAB6AP20340 208 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ACKR3P25106 362 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 FOLR3P41439 243 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RBP2P50120 134 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 GNG10P50151 68 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RAB2AP61019 212 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 FOXO1Q12778 655 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RTP5Q14D33 572 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 OR52W1Q6IF63 320 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 SULF2Q8IWU5 870 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF679Q8IYX0 411 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TMEM156Q8N614 296 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CCDC107Q8WV48 283 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 SLAMF9Q96A28 289 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ADOQ96SZ5 270 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TOLLIPQ9H0E2 274 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RIMS4Q9H426 269 aaPredicted RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 CRLF2Q9HC73 371 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PNRC2Q9NPJ4 139 aaKnown RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 MRPL22Q9NWU5 206 aaKnown RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 DKK4Q9UBT3 224 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CACFD1Q9UGQ2 172 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 MRM2Q9UI43 246 aaKnown RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF346Q9UL40 294 aaKnown RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 IER3IP1Q9Y5U9 82 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TRAV27A0A087WT01 109 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NPIPA5A0A0B4J1W7 369 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 IFITM10A6NMD0 228 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 ZNF724A8MTY0 619 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NPIPA7E9PJI5 369 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 MFNGO00587 321 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SFTA3P0C7M3 94 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NPIPA8P0DM63 369 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 TMIGD3P0DMS9 266 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 TPT1P13693 172 aaKnown RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 CXCR1P25024 350 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 RAB5CP51148 216 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SSR4P51571 173 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 Q0VFX4 171 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 GUSBP1Q15486 140 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 LBHQ53QV2 105 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 ADGRE4PQ86SQ3 457 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SEMA6DQ8NFY4 1073 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 PPP1R1CQ8WVI7 109 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NUDCD2Q8WVJ2 157 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 RGP1Q92546 391 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 SLC25A36Q96CQ1 311 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 MISP3Q96FF7 219 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 MARS2Q96GW9 593 aaKnown RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 SMIM8Q96KF7 97 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 OR8D2Q9GZM6 311 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 RHOFQ9HBH0 211 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 CYTL1Q9NRR1 136 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SERINC1Q9NRX5 453 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 FBXL4Q9UKA2 621 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 FAM96BQ9Y3D0 163 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 LOXL2Q9Y4K0 774 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NCKAP5O14513 1909 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 TRBV6-7A0A0A0MS04 114 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 TEX13DA0A0J9YY54 714 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 BTBD17A6NE02 478 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 LRRC3CA6NJW4 275 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 F5H0A9 414 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 H7C1Q1 480 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 AHSA1O95433 338 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 IFNA10P01566 189 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 HOXB5P09067 269 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 RAB5AP20339 215 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 HOXA5P20719 270 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 PTGER1P34995 402 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SLC6A9P48067 706 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 ATP1B3P54709 279 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 CLDN12P56749 244 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 RAB4BP61018 213 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SLC17A1Q14916 467 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 C3orf36Q3SXR2 165 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 TP53I3Q53FA7 332 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 ATPAF1Q5TC12 328 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 OR10K2Q6IF99 312 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 BAP18Q8IXM2 172 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 C20orf196Q8IYI0 205 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 DEFB119Q8N690 84 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 CLEC1AQ8NC01 280 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NOXO1Q8NFA2 376 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 OR52E2Q8NGJ4 325 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 SAT2Q96F10 170 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 C4orf45Q96LM5 186 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 NECAB3Q96P71 396 aaPredicted RBP4.72□□□□□ -1.65
VPS41-203ENST00000395969 GAL3ST4Q96RP7 486 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 C2orf88Q9BSF0 95 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 CHST5Q9GZS9 411 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 EXO5Q9H790 373 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 PPP4R1LQ9P1A2 415 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 LPAR3Q9UBY5 353 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 ATP23Q9Y6H3 246 aa4.72□□□□□ -1.65
VPS41-203ENST00000395969 CACNA1DQ01668 2161 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms