RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 Q7L0L9 218 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 PRSS42Q7Z5A4 293 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 MUC20Q8N307 709 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ARHGAP5-AS1Q96IT6 56 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SCN10AQ9Y5Y9 1956 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 NXPH3O95157 252 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ADIRFQ15847 76 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 OR2A2Q6IF42 318 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF770Q6IQ21 691 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 JMJD6Q6NYC1 403 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 NAA40Q86UY6 237 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 CORO2AQ92828 525 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 HGDQ93099 445 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 PPP1R3CQ9UQK1 317 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 TRGV5A0A0B4J1U4 118 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 HSBP1L1C9JCN9 74 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SPRY1O43609 319 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ACSM4P0C7M7 580 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 FAM157BP0CG42 384 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 CPN1P15169 458 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 GPR12P47775 334 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 GSK3AP49840 483 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 RAC3P60763 192 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 LSM6P62312 80 aaKnown RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 MESP2Q0VG99 397 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 RPUSD3Q6P087 351 aaKnown RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 C16orf47Q6ZP98 133 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 C15orf54Q8N8G6 183 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ST6GAL2Q96JF0 529 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 CKAP5Q14008 2032 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 TRAV17A0A0B4J275 112 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SHISA7A6NL88 538 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SSSCA1O60232 199 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 NDUFB7P17568 137 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 AANATQ16613 207 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 C17orf107Q6ZR85 190 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 MRPS24Q96EL2 167 aaKnown RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 S1PR3Q99500 378 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SCN3AQ9NY46 2000 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 PPP1R2P9O14990 202 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 OIP5O43482 229 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 MBP02144 154 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 IFI6P09912 130 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A6P0DMU7 189 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A5P0DMU8 189 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A7P0DMV0 189 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 NAT2P11245 290 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF32P17041 273 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 SMIM21Q3B7S5 101 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A1Q5HYN5 189 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF468Q5VIY5 522 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 C1QL3Q5VWW1 255 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 C1orf87Q8N0U7 546 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 OR11G2Q8NGC1 345 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 OR52N4Q8NGI2 321 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 OR2Y1Q8NGV0 311 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A3Q8NHU0 189 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 TM4SF19Q96DZ7 209 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 RASL10BQ96S79 203 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FBXO4Q9UKT5 387 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 TMED3Q9Y3Q3 217 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 HMSDA8MTL9 139 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF705GA8MUZ8 300 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 UMAD1C9J7I0 102 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FOXS1O43638 330 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 DUS4LO95620 317 aaKnown RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 PTAFRP25105 342 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 MPLP40238 635 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FAHD2BQ6P2I3 314 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF321PQ8N8H1 164 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 PTPMT1Q8WUK0 201 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FBLIM1Q8WUP2 373 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ASB10Q8WXI3 467 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FAHD2AQ96GK7 314 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 PRRX2Q99811 253 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 FRRS1LQ9P0K9 344 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 LIPT2A6NK58 231 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ELLP55199 621 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 TMEM91Q6ZNR0 172 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ADGRG3Q86Y34 549 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 LHX4Q969G2 390 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 PIK3IP1Q96FE7 263 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 C10orf90Q96M02 699 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 SHARPINQ9H0F6 387 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CNTD2Q9H8S5 307 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF107Q9UII5 783 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 CCDC88CQ9P219 2028 aa10.56□□□□□ -0.72
DEPDC1-201ENST00000370966 IGKV1-8A0A0C4DH67 115 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 PTP4A3O75365 173 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 ACAA2P42765 397 aaKnown RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 FAM74A1Q5RGS3 127 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms