RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 FAM160A2Q8N612 972 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 CYYR1Q96J86 154 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 FAM210BQ96KR6 192 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 CDCA3Q99618 268 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 COA3Q9Y2R0 106 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 NSA2O95478 260 aaKnown RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 EML2O95834 649 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 RGS19P49795 217 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 SNU13P55769 128 aaKnown RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 RND3P61587 244 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 ARHGEF39Q8N4T4 335 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 RELTQ969Z4 430 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 ARHGAP5-AS1Q96IT6 56 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 DDA1Q9BW61 102 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 TBC1D29Q9UFV1 150 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 PITPNC1Q9UKF7 332 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 FTCDNL1E5RQL4 147 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 EREGO14944 169 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 CDC14BO60729 498 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 RAB4AP20338 218 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 G0S2P27469 103 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 KCNG3Q8TAE7 436 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 RNASEH2CQ8TDP1 164 aaKnown RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 RCC1LQ96I51 464 aaKnown RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 NIPSNAP3BQ9BS92 247 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 ATG101Q9BSB4 218 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 BANF2Q9H503 90 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 FOXD3Q9UJU5 478 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 MRPS28Q9Y2Q9 187 aaKnown RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 CBY1Q9Y3M2 126 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 NUBP1P53384 320 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 C4orf17Q53FE4 359 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 AGBL4Q5VU57 503 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 RNF144BQ7Z419 303 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 GRASPQ7Z6J2 395 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 C16orf52Q8NHV5 167 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 FAM3CQ92520 227 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 SLC25A36Q96CQ1 311 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 KLHDC3Q9BQ90 382 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 TMEM59Q9BXS4 323 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 ACTR3CQ9C0K3 210 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 ZBP1Q9H171 429 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 TXNIPQ9H3M7 391 aa14.29□□□□□ -0.12
CHD1L-203ENST00000369259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD1L-203ENST00000369259 CXCL10P02778 98 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 GIMD1P0DJR0 217 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF823P16415 610 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 BCKDHBP21953 392 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 TCEA2Q15560 299 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 COL13A1Q5TAT6 717 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-203ENST00000369259 SLC35E3Q7Z769 313 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 LINC00346Q8IVM7 164 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 C1orf87Q8N0U7 546 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 PLPP5Q8NEB5 264 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 SPACA5Q96QH8 159 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 OR14J1Q9UGF5 321 aa14.28□□□□□ -0.12
CHD1L-203ENST00000369259 TRBV23OR9-2A0A075B6M9 112 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 TRAV36DV7A0A075B6V5 113 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 TGFBR3LH3BV60 316 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 TTRP02766 147 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 H2BFMP0C1H6 154 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 MMP16P51512 607 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 FOXK1P85037 733 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 SLC10A1Q14973 349 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 SGCBQ16585 318 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 DEGS2Q6QHC5 323 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 SULF2Q8IWU5 870 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 OR8G5Q8NG78 346 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 SNX22Q96L94 193 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.12
CHD1L-203ENST00000369259 KIAA1456Q9P272 454 aa14.27□□□□□ -0.12
CHD1L-203ENST00000369259 PGA4P0DJD7 388 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 PGA5P0DJD9 388 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 ACY1Q03154 408 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 POMZP3Q6PJE2 187 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 OR10G6Q8NH81 332 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 FOXQ1Q9C009 403 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 CENPMQ9NSP4 180 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 STARD5Q9NSY2 213 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 DEC1Q9P2X7 70 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 RCL1Q9Y2P8 373 aaKnown RBP14.27□□□□□ -0.13
CHD1L-203ENST00000369259 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.13
CHD1L-203ENST00000369259 CRYM-AS1A6NIL9 109 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 CDRT15L2A8MXV6 281 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 SCDO00767 359 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 XRCC2O43543 280 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 GPR3P46089 330 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 C21orf62-AS1Q17RA5 79 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 CHRFAM7AQ494W8 412 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 TMEM183AQ8IXX5 376 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 GPR87Q9BY21 358 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 FAM206AQ9NX38 181 aa14.26□□□□□ -0.13
CHD1L-203ENST00000369259 CYP8B1Q9UNU6 501 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms