RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 V9GYS6 101 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 ZNF732B4DXR9 585 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 CDIPTO14735 213 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 IGHA1P01876 353 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 RPSAP08865 295 aaKnown RBP16.07■□□□□ 0.16
SYNE4-202ENST00000340477 CCL1P22362 96 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 THBS2P35442 1172 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 PITPNBP48739 271 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 OR12D2P58182 307 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 ADARB1P78563 741 aaKnown RBP16.07■□□□□ 0.16
SYNE4-202ENST00000340477 MICBQ29980 383 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 TMEM244Q5VVB8 128 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 SFRP4Q6FHJ7 346 aaPredicted RBP16.07■□□□□ 0.16
SYNE4-202ENST00000340477 WDR82Q6UXN9 313 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 IL17RELQ6ZVW7 336 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 KRT74Q7RTS7 529 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 LHFPL3Q86UP9 236 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 SYS1Q8N2H4 156 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 GCSAMQ8N6F7 178 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 OR52I1Q8NGK6 324 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 OR10Z1Q8NGY1 313 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 OR2G2Q8NGZ5 317 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 CNIH3Q8TBE1 160 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 HPSE2Q8WWQ2 592 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 TLNRD1Q9H1K6 362 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 PPP1R3EQ9H7J1 279 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 MRPS18AQ9NVS2 196 aaKnown RBP16.07■□□□□ 0.16
SYNE4-202ENST00000340477 CLN8Q9UBY8 286 aa16.07■□□□□ 0.16
SYNE4-202ENST00000340477 PPIAL4CA0A0B4J2A2 164 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 A0A1B0GTI1 187 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 LOC107986453A0A1B0GWG9 222 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 A8MXK9 166 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 WBP4O75554 376 aaKnown RBP16.06■□□□□ 0.16
SYNE4-202ENST00000340477 GATBO75879 557 aaKnown RBP16.06■□□□□ 0.16
SYNE4-202ENST00000340477 SERPINA3P01011 423 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 WNT2P09544 360 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 MYL12AP19105 171 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 PRSS35Q8N3Z0 413 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 C19orf18Q8NEA5 215 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 OR14K1Q8NGZ2 314 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 RPL3LQ92901 407 aaKnown RBP16.06■□□□□ 0.16
SYNE4-202ENST00000340477 TECTBQ96PL2 329 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 CHCHD3Q9NX63 227 aaKnown RBP16.06■□□□□ 0.16
SYNE4-202ENST00000340477 ERVK13-1Q9NX77 482 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 DNAJB11Q9UBS4 358 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 SLC7A11Q9UPY5 501 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 MYRFQ9Y2G1 1151 aa16.06■□□□□ 0.16
SYNE4-202ENST00000340477 ANKRD61A6NGH8 418 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 MUC1P15941 1255 aaPredicted RBP16.05■□□□□ 0.16
SYNE4-202ENST00000340477 DCKP27707 260 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 NPY4RP50391 375 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 CCR9P51686 369 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 SMN1Q16637 294 aaKnown RBP16.05■□□□□ 0.16
SYNE4-202ENST00000340477 FDX2Q6P4F2 183 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 SCCPDHQ8NBX0 429 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 C10orf35Q96D05 121 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 PELI1Q96FA3 418 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 METTL17Q9H7H0 456 aaPredicted RBP16.05■□□□□ 0.16
SYNE4-202ENST00000340477 FGF20Q9NP95 211 aaPredicted RBP16.05■□□□□ 0.16
SYNE4-202ENST00000340477 GPR173Q9NS66 373 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 ERVK-18Q9QC07 812 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 NKX1-2Q9UD57 310 aaPredicted RBP16.05■□□□□ 0.16
SYNE4-202ENST00000340477 JMJD1CQ15652 2540 aa16.05■□□□□ 0.16
SYNE4-202ENST00000340477 SRRM5B3KS81 715 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 H3BSH0 61 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 PHF1O43189 567 aaPredicted RBP16.04■□□□□ 0.16
SYNE4-202ENST00000340477 ADAM20O43506 726 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 LHBP01229 141 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 CCDC159P0C7I6 412 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 ZNF20P17024 532 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 CFHR2P36980 270 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 KIR3DL2P43630 455 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 GBX2P52951 348 aaPredicted RBP16.04■□□□□ 0.16
SYNE4-202ENST00000340477 SEC61A1P61619 476 aaKnown RBP16.04■□□□□ 0.16
SYNE4-202ENST00000340477 KRTAP21-3Q3LHN1 58 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 FAM76BQ5HYJ3 339 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 TEX36Q5VZQ5 186 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 BTNL3Q6UXE8 466 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 TMPRSS11AQ6ZMR5 421 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 Q6ZSR3 168 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 ZNF573Q86YE8 665 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 C11orf53Q8IXP5 236 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 ZNF676Q8N7Q3 588 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 ZNF671Q8TAW3 534 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 C12orf43Q96C57 262 aaKnown RBP16.04■□□□□ 0.16
SYNE4-202ENST00000340477 MRI1Q9BV20 369 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 JAM3Q9BX67 310 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 COMMD4Q9H0A8 199 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 POLR3KQ9Y2Y1 108 aaPredicted RBP16.04■□□□□ 0.16
SYNE4-202ENST00000340477 WNK2Q9Y3S1 2297 aa16.04■□□□□ 0.16
SYNE4-202ENST00000340477 DOCK11Q5JSL3 2073 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 IGHV3OR15-7A0A075B7D8 119 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 NKX6-3A6NJ46 265 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 GYPAP02724 150 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 ISG15P05161 165 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 EGR1P18146 543 aa16.03■□□□□ 0.16
SYNE4-202ENST00000340477 ZFP36P26651 326 aaKnown RBP16.03■□□□□ 0.16
SYNE4-202ENST00000340477 ALKBH1Q13686 389 aaKnown RBP16.03■□□□□ 0.16
SYNE4-202ENST00000340477 CNN3Q15417 329 aaKnown RBP16.03■□□□□ 0.16
SYNE4-202ENST00000340477 TMEM42Q69YG0 159 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms