RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 OR2B11Q5JQS5 317 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 PRR22Q8IZ63 422 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 PBDC1Q9BVG4 233 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 TBL1XR1Q9BZK7 514 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 RAB33BQ9H082 229 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 CHRDQ9H2X0 955 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 C8orf33Q9H7E9 229 aaPredicted RBP15.56■□□□□ 0.08
RAB40C-205ENST00000539661 STRAPQ9Y3F4 350 aaKnown RBP15.56■□□□□ 0.08
RAB40C-205ENST00000539661 TRBV23-1A0A0A0MS06 115 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 A0A1B0GW64 132 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 NPIPA5E9PKD4 350 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF354AO60765 605 aaPredicted RBP15.56■□□□□ 0.08
RAB40C-205ENST00000539661 BCKDHBP21953 392 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 FMODQ06828 376 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 FOXRED2Q8IWF2 684 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 OR5AS1Q8N127 324 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 OR10H5Q8NGA6 315 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 ARHGAP5-AS1Q96IT6 56 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 FOXQ1Q9C009 403 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 EIF5A2Q9GZV4 153 aaKnown RBP15.56■□□□□ 0.08
RAB40C-205ENST00000539661 SLC35B3Q9H1N7 401 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 SMDT1Q9H4I9 107 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 PNO1Q9NRX1 252 aaKnown RBP15.56■□□□□ 0.08
RAB40C-205ENST00000539661 NPIPA1Q9UND3 350 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 BORCS7-ASMTA0A0B4J1R7 106 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 FTCDNL1E5RQL4 147 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 TSPAN2O60636 221 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 IFNA21P01568 189 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 HLA-DOBP13765 273 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 HOXA5P20719 270 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 CSNK2A1P68400 391 aaPredicted RBP15.55■□□□□ 0.08
RAB40C-205ENST00000539661 FAM219AQ8IW50 185 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM151BQ8IW70 566 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF565Q8N9K5 539 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 CSNK2A3Q8NEV1 391 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 EHFQ9NZC4 300 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 H0YIG0 161 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 WISP1O95388 367 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 IGKV3-11P04433 115 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 LMO1P25800 156 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 PTGER4P35408 488 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 SNU13P55769 128 aaKnown RBP15.55■□□□□ 0.08
RAB40C-205ENST00000539661 SSTP61278 116 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF239Q16600 458 aaKnown RBP15.55■□□□□ 0.08
RAB40C-205ENST00000539661 FAM89BQ8N5H3 189 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 FGF14Q92915 247 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 TCTN2Q96GX1 697 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 GINS3Q9BRX5 216 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 OR8D2Q9GZM6 311 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 KCNJ16Q9NPI9 418 aa15.55■□□□□ 0.08
RAB40C-205ENST00000539661 RHPN2P1A8MT19 583 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 MS4A18H0YCH9 400 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 DAOP14920 347 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 OR2B8PP59922 312 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 HSD11B2P80365 405 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 MS4A18Q3C1V0 323 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 DBX2Q6ZNG2 339 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 SFTPA2Q8IWL1 248 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 PNLDC1Q8NA58 520 aaKnown RBP15.54■□□□□ 0.08
RAB40C-205ENST00000539661 LFNGQ8NES3 379 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 GPR119Q8TDV5 335 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 YPEL4Q96NS1 127 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 S100A13Q99584 98 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 MMACHCQ9Y4U1 282 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-205ENST00000539661 ATG2AQ2TAZ0 1938 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 A0A1W2PQF6 199 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 OR3A4PP47883 348 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 CAMLGP49069 296 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 HHEXQ03014 270 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF616Q08AN1 781 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 RPUSD3Q6P087 351 aaKnown RBP15.54■□□□□ 0.08
RAB40C-205ENST00000539661 C20orf24Q9BUV8 137 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 OR10A2Q9H208 303 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 BANF2Q9H503 90 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 C19orf12Q9NSK7 152 aa15.54■□□□□ 0.08
RAB40C-205ENST00000539661 E5RGE8 158 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 NME2P1O60361 137 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 SLC34A2O95436 690 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 COL9A1P20849 921 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 AKT2P31751 481 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 EIF3IQ13347 325 aaKnown RBP15.53■□□□□ 0.08
RAB40C-205ENST00000539661 HEPN1Q6WQI6 88 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 SGPP2Q8IWX5 399 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF721Q8TF20 911 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 C11orf40Q8WZ69 217 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 GAL3ST4Q96RP7 486 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 ST6GALNAC5Q9BVH7 336 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 OR11A1Q9GZK7 315 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 PISDQ9UG56 409 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 NSG2Q9Y328 171 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 C17orf51A8MQB3 221 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 C5orf67F2Z3F1 127 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 SDCBPO00560 298 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-205ENST00000539661 CRTAPO75718 401 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-205ENST00000539661 ARG1P05089 322 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 P2RY1P47900 373 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 CDX1P47902 265 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-205ENST00000539661 SLC35A1P78382 337 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 DLX2Q07687 328 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms