RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	AQP1	P29972	269 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PRDX2	P32119	198 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CD80	P33681	288 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	UGT2B10	P36537	528 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	NAA10	P41227	235 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PTGFR	P43088	359 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	GSS	P48637	474 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	RASSF2	P50749	326 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DLX5	P56178	289 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	MTPN	P58546	118 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC35A1	P78382	337 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ELF3	P78545	371 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PPP2R2B	Q00005	443 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAM27E3	Q08E93	113 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	RBBP4	Q09028	425 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	GK2	Q14410	553 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	TRMT5	Q32P41	509 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	COQ5	Q5HYK3	327 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ALG10B	Q5I7T1	473 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PAGE3	Q5JUK9	113 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	LCN1P1	Q5VSP4	162 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ASPHD2	Q6ICH7	369 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	NIPAL3	Q6P499	406 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CD164L2	Q6UWJ8	174 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	C5orf46	Q6UWT4	87 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CASP12	Q6UXS9	341 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMPPE	Q6ZT21	453 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	SSX8	Q7RTT4	187 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ARPIN	Q7Z6K5	226 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FUNDC1	Q8IVP5	155 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	STH	Q8IWL8	128 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	LAX1	Q8IWV1	398 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ARHGAP24	Q8N264	748 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	LRRC17	Q8N6Y2	441 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ACBD4	Q8NC06	268 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR52E4	Q8NGH9	312 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM170A	Q8WVE7	144 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	APH1A	Q96BI3	265 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC25A36	Q96CQ1	311 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCDC124	Q96CT7	223 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DGCR14	Q96DF8	476 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	MUCL1	Q96DR8	90 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DNAJA3	Q96EY1	480 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PIK3IP1	Q96FE7	263 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	EPYC	Q99645	322 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ECSIT	Q9BQ95	431 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FNDC11	Q9BVV2	318 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	SRXN1	Q9BYN0	137 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR11A1	Q9GZK7	315 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ACTR6	Q9GZN1	396 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PPIL3	Q9H2H8	161 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM38A	Q9H6F2	299 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ESRP2	Q9H6T0	727 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM27	Q9HBJ8	222 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PLGRKT	Q9HBL7	147 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	BCL2L10	Q9HD36	194 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	GPR173	Q9NS66	373 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	HIF1AN	Q9NWT6	349 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	MTCH1	Q9NZJ7	389 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	VAPA	Q9P0L0	249 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	LSM4	Q9Y4Z0	139 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PTPN13	Q12923	2485 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	KIAA1549	Q9HCM3	1950 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FLNC	Q14315	2725 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FREM3	P0C091	2139 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ICE1	Q9Y2F5	2266 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	USP9X	Q93008	2570 aa	Predicted RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CIB4	A0PJX0	185 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM72	A0PK05	275 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM89	A2RUT3	159 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCT8L1P	A6NM43	557 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF724	A8MTY0	619 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792		A8MVM7	634 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC22A2	O15244	555 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR2T1	O43869	369 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RBBP9	O75884	186 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	VAMP5	O95183	116 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	C1QC	P02747	245 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RAF1	P04049	648 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	FGF2	P09038	288 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ACAA1	P09110	424 aa	Predicted RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SAG	P10523	405 aa	Predicted RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	NQO1	P15559	274 aa	Known RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CD1E	P15812	388 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	GPX2	P18283	190 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TUBG1	P23258	451 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	GABRA5	P31644	462 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR3A2	P47893	321 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ART1	P52961	327 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	P2RX3	P56373	397 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SEC61G	P60059	68 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TGFBR3	Q03167	851 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	BAMBI	Q13145	260 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ITGAD	Q13349	1161 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CEACAM7	Q14002	265 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	P2RY6	Q15077	328 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR7A5	Q15622	319 aa		4.04	□□□□□ -1.76

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