RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	RCN3	Q96D15	328 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MRAP2	Q96G30	205 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SPATA33	Q96N06	139 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR6C1	Q96RD1	312 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RAB40C	Q96S21	281 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	C20orf144	Q9BQM9	153 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TRIM51	Q9BSJ1	452 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RAB11FIP5	Q9BXF6	653 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	C1QTNF4	Q9BXJ3	329 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TMEM39B	Q9GZU3	492 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	NAA50	Q9GZZ1	169 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CST9L	Q9H4G1	147 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TBC1D17	Q9HA65	648 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CALHM2	Q9HA72	323 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839		Q9N2K0	584 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LGALS13	Q9UHV8	139 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	UBQLN1	Q9UMX0	589 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SAMD4A	Q9UPU9	718 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	COL5A2	P05997	1499 aa	Predicted RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PKD1L3	Q7Z443	1732 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TP53BP1	Q12888	1972 aa	Predicted RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SCN4A	P35499	1836 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ATRN	O75882	1429 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LAMB4	A4D0S4	1761 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RGPD8	O14715	1765 aa	Predicted RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	GLYATL1P3	A0A0U1RQE8	302 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PRSS51	A0A1B0GVH4	220 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839		A0A1W2PR80	420 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PSMB11	A5LHX3	300 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	FAM90A26	D6RGX4	464 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MYL12B	O14950	172 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CEACAM4	O75871	244 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LRAT	O95237	230 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MOCS3	O95396	460 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CNIH1	O95406	144 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	HPRT1	P00492	218 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	UCHL1	P09936	223 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RAB40AL	P0C0E4	278 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SLC2A2	P11168	524 aa	Predicted RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	UGT2B7	P16662	529 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SDC1	P18827	310 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MYL12A	P19105	171 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	GABARAPL2	P60520	117 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	BTN3A2	P78410	334 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LCN2	P80188	198 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CDK6	Q00534	326 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	DEFA5	Q01523	94 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MXD1	Q05195	221 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CD47	Q08722	323 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	GK3P	Q14409	553 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	JOSD1	Q15040	202 aa	Predicted RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CTF1	Q16619	201 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CDO1	Q16878	200 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	GLYR1	Q49A26	553 aa	Predicted RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MORN2	Q502X0	79 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR52W1	Q6IF63	320 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR4A47	Q6IF82	309 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PODNL1	Q6PEZ8	512 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	WDR59	Q6PJI9	974 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	DET1	Q7L5Y6	550 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF720	Q7Z2F6	126 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CBWD2	Q8IUF1	395 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF683	Q8IZ20	524 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR7A2P	Q8NGA2	310 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RND1	Q92730	232 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RERG	Q96A58	199 aa	Predicted RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RTP4	Q96DX8	246 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	REEP6	Q96HR9	211 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	JSRP1	Q96MG2	331 aa	Predicted RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TGM7	Q96PF1	710 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CSF3R	Q99062	836 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	AGPAT1	Q99943	283 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	BARHL1	Q9BZE3	327 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SLIRP	Q9GZT3	109 aa	Known RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SIRPD	Q9H106	197 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	DPAGT1	Q9H3H5	408 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF385D	Q9H6B1	395 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ALG9	Q9H6U8	611 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RNF121	Q9H920	327 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LRTM1	Q9HBL6	345 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SMCO4	Q9NRQ5	59 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	IL17C	Q9P0M4	197 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	VPREB3	Q9UKI3	123 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR10H1	Q9Y4A9	318 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CSDC2	Q9Y534	153 aa	Known RBP	4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	C5	P01031	1676 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ALS2	Q96Q42	1657 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SCN11A	Q9UI33	1791 aa		4.56	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	DENND4A	Q7Z401	1863 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LRP5	O75197	1615 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LRP6	O75581	1613 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PAPPA	Q13219	1627 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TJP1	Q07157	1748 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	KIR2DL5B	A0A0G2JN68	375 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	KIR2DL5B	A0A0G2JPC4	375 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TMEM269	A0A1B0GVZ9	245 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ATP6AP2	A0A1C7CYW4	349 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ARL5C	A6NH57	179 aa		4.55	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ANKRD30BL	A7E2S9	258 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms