RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 MDH2P40926 338 aaKnown RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 MAP2K3P46734 347 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 MTNR1AP48039 350 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 DVL1P1P54792 670 aaPredicted RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 EGR3Q06889 387 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 PRDX4Q13162 271 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 CEP78Q5JTW2 689 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 FAM220AQ7Z4H9 259 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 FTMTQ8N4E7 242 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 SEMA6DQ8NFY4 1073 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 ADI1Q9BV57 179 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 FAM118AQ9NWS6 357 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 SMPD3Q9NY59 655 aaPredicted RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 HAO2Q9NYQ3 351 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 RNF7Q9UBF6 113 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 LPAR3Q9UBY5 353 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 MRM2Q9UI43 246 aaKnown RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 OR52A1Q9UKL2 312 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 SLC22A13Q9Y226 551 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 PIGLQ9Y2B2 252 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 R4GMQ9 66 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 SONP18583 2426 aaKnown RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 IGHV3OR15-7A0A075B7D8 119 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 METTL15A6NJ78 407 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 CEACAM18A8MTB9 384 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 J3QLW9 94 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 PHF1O43189 567 aaPredicted RBP9.28□□□□□ -0.92
DDB1-222ENST00000543627 CLIC3O95833 236 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 IFNA2P01563 188 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 ZNF19P17023 458 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 PCMT1P22061 227 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 ACKR3P25106 362 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 SEC61A1P61619 476 aaKnown RBP9.28□□□□□ -0.92
DDB1-222ENST00000543627 SNRPGP62308 76 aaKnown RBP9.28□□□□□ -0.92
DDB1-222ENST00000543627 CSNK2BP67870 215 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 ROM1Q03395 351 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 RIPPLY1Q0D2K3 151 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 SNCBQ16143 134 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 DCAF12L2Q5VW00 463 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 LIPNQ5VXI9 398 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 PRIMA1Q86XR5 153 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 ZDHHC23Q8IYP9 409 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 ENTHD1Q8IYW4 607 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 MUC20Q8N307 709 aaPredicted RBP9.28□□□□□ -0.92
DDB1-222ENST00000543627 CELF2-AS1Q8N7Q2 184 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 RPL3LQ92901 407 aaKnown RBP9.28□□□□□ -0.92
DDB1-222ENST00000543627 Q96MT0 163 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 TMEM246Q9BRR3 403 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 RTL8AQ9BWD3 113 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 PATZ1Q9HBE1 687 aaKnown RBP9.28□□□□□ -0.92
DDB1-222ENST00000543627 TMEM165Q9HC07 324 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 SNX5Q9Y5X3 404 aa9.28□□□□□ -0.92
DDB1-222ENST00000543627 TRAV20A0A0B4J274 112 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 A0A1B0GVI7 797 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ACOD1A6NK06 481 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 KIAA1324LA8MWY0 1029 aaPredicted RBP9.27□□□□□ -0.93
DDB1-222ENST00000543627 CDIPTO14735 213 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 MTRF1O75570 445 aaKnown RBP9.27□□□□□ -0.93
DDB1-222ENST00000543627 FOXH1O75593 365 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 GYPAP02724 150 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 TTRP02766 147 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 FAHP16930 419 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
DDB1-222ENST00000543627 PEX2P28328 305 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 DCTDP32321 178 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 GPM6AP51674 278 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 GNB2P62879 340 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ZNF85Q03923 595 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.93
DDB1-222ENST00000543627 TMED1Q13445 227 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 OCLNQ16625 522 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 TMEM155Q4W5P6 130 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ESCO2Q56NI9 601 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 PLCXD3Q63HM9 321 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 LYPD2Q6UXB3 125 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 LHFPL3Q86UP9 236 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 KLBQ86Z14 1044 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 OR1M1Q8NGA1 313 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 LRRC29Q8WV35 223 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ERGIC1Q969X5 290 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 RASSF4Q9H2L5 321 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 OCEL1Q9H607 264 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 C7orf69Q9H7B7 122 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 GPR173Q9NS66 373 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ZNF391Q9UJN7 358 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 MPC1Q9Y5U8 109 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ABCA2Q9BZC7 2435 aa9.27□□□□□ -0.93
DDB1-222ENST00000543627 ANK3Q12955 4377 aaKnown RBP9.26□□□□□ -0.93
DDB1-222ENST00000543627 A0A0G2JMP0 313 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 A0A0U1RQV5 110 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 A0A0X1KG70 313 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 ZNF816-ZNF321PA0A0X1KG74 233 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 ZNF732B4DXR9 585 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 SYT7O43581 403 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 MPZL2O60487 215 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 RGS9O75916 674 aaPredicted RBP9.26□□□□□ -0.93
DDB1-222ENST00000543627 FAM157CP0CG43 387 aa9.26□□□□□ -0.93
DDB1-222ENST00000543627 DBTP11182 482 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms