RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 WDR89Q96FK6 387 aaPredicted RBP13.05□□□□□ -0.32
NUP54-217ENST00000514987 ZNF799Q96GE5 643 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 LYZL4Q96KX0 146 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 TAAR9Q96RI9 348 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 S100A13Q99584 98 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 DDA1Q9BW61 102 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 CHST5Q9GZS9 411 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 PLEK2Q9NYT0 353 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 ZNF391Q9UJN7 358 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 LOXL2Q9Y4K0 774 aa13.05□□□□□ -0.32
NUP54-217ENST00000514987 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 A0A0A6YYD4 124 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 IGKV1-9A0A0C4DH69 117 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 OR5H14A6NHG9 310 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 CEACAM18A8MTB9 384 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 MFNGO00587 321 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 SOCS1O15524 211 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 DUS4LO95620 317 aaKnown RBP13.04□□□□□ -0.32
NUP54-217ENST00000514987 IL13RA1P78552 427 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 SCRN3Q0VDG4 424 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 ACER2Q5QJU3 275 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 PDSS1Q5T2R2 415 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 ZNF546Q86UE3 836 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 LRRC18Q8N456 261 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 SPACA5Q96QH8 159 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 NICN1Q9BSH3 213 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 SOX7Q9BT81 388 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 TM2D1Q9BX74 207 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 SRXN1Q9BYN0 137 aa13.04□□□□□ -0.32
NUP54-217ENST00000514987 A0A1B0GW55 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 SGCEO43556 437 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 OR2F2O95006 317 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4L2P0CJ85 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4L3P0CJ86 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4L4P0CJ87 422 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4L5P0CJ88 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4L6P0CJ89 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4L7P0CJ90 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 TAS2R46P59540 309 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 PCBD1P61457 104 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 OR2F1Q13607 317 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ARFRP1Q13795 201 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ZNF345Q14585 488 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
NUP54-217ENST00000514987 PLAC9Q5JTB6 97 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 TOR2AQ5JU69 321 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ZNF468Q5VIY5 522 aaPredicted RBP13.03□□□□□ -0.32
NUP54-217ENST00000514987 OR51T1Q8NGJ9 327 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 OR2V1Q8NHB1 315 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 CT55Q8WUE5 264 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 HAS2Q92819 552 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 FBXW5Q969U6 566 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 SPSB1Q96BD6 273 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 PDCD10Q9BUL8 212 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 BANF2Q9H503 90 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ZNF224Q9NZL3 707 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 DUX4Q9UBX2 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 A0A0B4J2A0 478 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 OR2AT4A6NND4 320 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 EFSO43281 561 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 PMP2P02689 132 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 MGMTP16455 207 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 CRYGSP22914 178 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 CPT2P23786 658 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 CYB561P49447 251 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 TMEM50BP56557 158 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
NUP54-217ENST00000514987 CYCSP99999 105 aaKnown RBP13.03□□□□□ -0.32
NUP54-217ENST00000514987 PPP1R1AQ13522 171 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 AANATQ16613 207 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 HYAL4Q2M3T9 481 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 SLC22A6Q4U2R8 563 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 NSUN5P2Q63ZY6 315 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ABLIM2Q6H8Q1 611 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 JMJD6Q6NYC1 403 aaPredicted RBP13.03□□□□□ -0.32
NUP54-217ENST00000514987 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 GGNQ86UU5 652 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ESX1Q8N693 406 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 TMEM185AQ8NFB2 350 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 SEMA6DQ8NFY4 1073 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 OR5H2Q8NGV7 314 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 FBXO17Q96EF6 278 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
NUP54-217ENST00000514987 SHPKQ9UHJ6 478 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 PIGLQ9Y2B2 252 aa13.03□□□□□ -0.32
NUP54-217ENST00000514987 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 I3L521 148 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 FCGR2AP12318 317 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 CNR1P21554 472 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 PRKACBP22694 351 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 MICBQ29980 383 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 TMEM128Q5BJH2 165 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 C11orf87Q6NUJ2 197 aa13.02□□□□□ -0.33
NUP54-217ENST00000514987 YRDCQ86U90 279 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms