RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 CKLFQ9UBR5 152 aa6.88□□□□□ -1.31
RBM28-206ENST00000487602 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
RBM28-206ENST00000487602 AK6Q9Y3D8 172 aaKnown RBP6.88□□□□□ -1.31
RBM28-206ENST00000487602 V9GY05 133 aa6.88□□□□□ -1.31
RBM28-206ENST00000487602 FLNCQ14315 2725 aa6.88□□□□□ -1.31
RBM28-206ENST00000487602 SMIM30A4D0T7 59 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 NOTOA8MTQ0 251 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 ATP6V1G2-DDX39BF2Z307 99 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 ABCD4O14678 606 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 GMDSO60547 372 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 NCR1O76036 304 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 CST4P01036 141 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 NRASP01111 189 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 ALDOBP05062 364 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PRF1P14222 555 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 ZNF250P15622 560 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 SELEP16581 610 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 KITLGP21583 273 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 BDKRB2P30411 391 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 GCH1P30793 250 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 SOX6P35712 828 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 MPV17P39210 176 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 CAV3P56539 151 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 OR10A3P58181 314 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 RPS23P62266 143 aaKnown RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 SPOCK1Q08629 439 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PSG7Q13046 419 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 HNRNPA0Q13151 305 aaKnown RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 UBE2V2Q15819 145 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 BEX5Q5H9J7 111 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 MBNL2Q5VZF2 373 aaKnown RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 GLT8D1Q68CQ7 371 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 NR2C2APQ86WQ0 139 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 CROCCP3Q8IVE0 287 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 OR5AS1Q8N127 324 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 NUP37Q8NFH4 326 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 OR51A2Q8NGJ7 313 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 OR13C9Q8NGT0 318 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PIGCQ92535 297 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PLPPR2Q96GM1 343 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 BARHL1Q9BZE3 327 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 SLIRPQ9GZT3 109 aaKnown RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 NXF2Q9GZY0 626 aaKnown RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 TMEM138Q9NPI0 162 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 GPR173Q9NS66 373 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PLEKHB1Q9UF11 243 aaPredicted RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 KCNN3Q9UGI6 736 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PURGQ9UJV8 347 aaKnown RBP6.87□□□□□ -1.31
RBM28-206ENST00000487602 RHBDD3Q9Y3P4 386 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
RBM28-206ENST00000487602 HCFC1P51610 2035 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 A0A075B6Q4 140 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 IGKV1-9A0A0C4DH69 117 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ANXA2P2A6NMY6 339 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ANKRD30BLA7E2S9 258 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ZNF850A8MQ14 1090 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 IQCF6A8MYZ5 107 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 C19orf84I3L1E1 186 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 SULT1B1O43704 296 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 CD3EP07766 207 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ERCC1P07992 297 aaPredicted RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 PRKACBP22694 351 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 LOXP28300 417 aaPredicted RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 KIR2DL3P43628 341 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 FABP6P51161 128 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 SRSF1Q07955 248 aaKnown RBP eCLIP6.86□□□□□ -1.312e-8■■□□□ 12.1
RBM28-206ENST00000487602 CNN3Q15417 329 aaKnown RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 MSMPQ1L6U9 139 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ALKBH6Q3KRA9 238 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ZNF404Q494X3 552 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 SFXN4Q6P4A7 337 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 SLC22A25Q6T423 547 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 MOB3CQ70IA8 216 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 LYPD6Q86Y78 171 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 CDH26Q8IXH8 852 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 SYNPRQ8TBG9 265 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 UBASH3BQ8TF42 649 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 SSC4DQ8WTU2 575 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 FAM222BQ8WU58 562 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 TMEM171Q8WVE6 324 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 FOXRED1Q96CU9 486 aaPredicted RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 TECTBQ96PL2 329 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 MMP27Q9H306 513 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 NEK6Q9HC98 313 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 CRIM1Q9NZV1 1036 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 MRPL15Q9P015 296 aaKnown RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 CMAHPQ9Y471 501 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 MPC1Q9Y5U8 109 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ATP23Q9Y6H3 246 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 A3GALT2U3KPV4 340 aa6.86□□□□□ -1.31
RBM28-206ENST00000487602 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
RBM28-206ENST00000487602 IGLV3-9A0A075B6K5 115 aa6.85□□□□□ -1.31
RBM28-206ENST00000487602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.85□□□□□ -1.31
RBM28-206ENST00000487602 IFITM5A6NNB3 132 aa6.85□□□□□ -1.31
RBM28-206ENST00000487602 VSTM5A8MXK1 200 aa6.85□□□□□ -1.31
RBM28-206ENST00000487602 DEFB108AA8MXU0 73 aa6.85□□□□□ -1.31
RBM28-206ENST00000487602 SHISA9B4DS77 424 aa6.85□□□□□ -1.31
RBM28-206ENST00000487602 AIPO00170 330 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms