RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SOX4Q06945 474 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 ZBTB34Q8NCN2 500 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 TMEM37Q8WXS4 190 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 MAP6Q96JE9 813 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 SUSD3Q96L08 255 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 TUBA4BQ9H853 241 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 HEXA-AS1Q9H8Q6 139 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ZNF724A8MTY0 619 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 K7ESF4 209 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 FZD6O60353 706 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 GBAP04062 536 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 MRPL3P09001 348 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 CD8BP10966 210 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ATF1P18846 271 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 VDAC1P21796 283 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 FBLN1P23142 703 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CNTFRP26992 372 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 DHRS4L2Q6PKH6 230 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 LRRC55Q6ZSA7 311 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 Q6ZSR6 202 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 OR52E1Q8NGJ3 308 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 TXNDC17Q9BRA2 123 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 COQ10BQ9H8M1 238 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 SPHK2Q9NRA0 654 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ICAM5Q9UMF0 924 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 NPTNQ9Y639 398 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 MST1RQ04912 1400 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 DOCK6Q96HP0 2047 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CLDN7O95471 211 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 LALBAP00709 142 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 OPN1MWP04001 364 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 OPN1MW2P0DN77 364 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 OPN1MW3P0DN78 364 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 TPMTP51580 245 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CYHR1Q6ZMK1 362 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 RPS19BP1Q86WX3 136 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 OR2D3Q8NGH3 330 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 PSMG2Q969U7 264 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 NAT8BQ9UHF3 227 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 GLI2P10070 1586 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 YDJCA8MPS7 323 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 NPFFO15130 113 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 LGALS1P09382 135 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 OR4A8P0C604 315 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 RPS4Y1P22090 263 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 MPSTP25325 297 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 SOX3P41225 446 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 PSG9Q00887 426 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ASAH1Q13510 395 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ZNF770Q6IQ21 691 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 SIAH3Q8IW03 269 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 KISS1RQ969F8 398 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 ZNF845Q96IR2 970 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 IL37Q9NZH6 218 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CBLCQ9ULV8 474 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 TCRBV3S1A0A5B6 114 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 RHBDL1O75783 438 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CALCBP10092 127 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 SEC61GP60059 68 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 PRDX1Q06830 199 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 CLN3Q13286 438 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 HYAL4Q2M3T9 481 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 LIAT1Q6ZQX7 453 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ZNF818PQ6ZRF7 136 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 TMEM136Q6ZRR5 245 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CTU1Q7Z7A3 348 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 C2orf73Q8N5S3 287 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 RXFP4Q8TDU9 374 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 MED30Q96HR3 178 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 SELENOIQ9C0D9 397 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 IQSEC2Q5JU85 1478 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 SPATA31D1Q6ZQQ2 1576 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 FAM171A2A8MVW0 826 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 HSD17B6O14756 317 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 TNFSF11O14788 317 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 KLF11O14901 512 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 UPK1BO75841 260 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 RNASE1P07998 156 aaKnown RBP4.93□□□□□ -1.62
USF3-202ENST00000478658 F7P08709 466 aaPredicted RBP4.93□□□□□ -1.62
USF3-202ENST00000478658 EFNB2P52799 333 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 NHLRC3Q5JS37 347 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 ZNF691Q5VV52 312 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 CORO6Q6QEF8 472 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 FAM57BQ71RH2 274 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 TMEM251Q8N6I4 163 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 OIT3Q8WWZ8 545 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 STARD4Q96DR4 205 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 C12orf42Q96LP6 360 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 ABHD1Q96SE0 405 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 DHRS4Q9BTZ2 278 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 C1QTNF6Q9BXI9 259 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 CPEB1Q9BZB8 566 aaKnown RBP4.93□□□□□ -1.62
USF3-202ENST00000478658 TNFSF18Q9UNG2 199 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 SLC17A4Q9Y2C5 497 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 OR2W1Q9Y3N9 320 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 ABCC6O95255 1503 aa4.93□□□□□ -1.62
USF3-202ENST00000478658 TRAV38-1A0A0B4J264 116 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms