RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 REI1P38344 393 aaPredicted RBP2.9□□□□□ -1.95
snR43snR43 YIR016WP40572 265 aa2.9□□□□□ -1.95
snR43snR43 MAF1P41910 395 aa2.9□□□□□ -1.95
snR43snR43 MRPS18P42847 217 aa2.9□□□□□ -1.95
snR43snR43 BFA1P47113 574 aa2.9□□□□□ -1.95
snR43snR43 ALT2P52892 507 aa2.9□□□□□ -1.95
snR43snR43 DSE4P53753 1117 aa2.9□□□□□ -1.95
snR43snR43 ROD1Q02805 837 aa2.9□□□□□ -1.95
snR43snR43 ADI1Q03677 179 aa2.9□□□□□ -1.95
snR43snR43 DOT1Q04089 582 aaKnown RBP2.9□□□□□ -1.95
snR43snR43 MFB1Q04922 465 aa2.9□□□□□ -1.95
snR43snR43 YDR341CQ05506 607 aaKnown RBP2.9□□□□□ -1.95
snR43snR43 JIP5Q06214 492 aaPredicted RBP2.9□□□□□ -1.95
snR43snR43 MRI1Q06489 411 aaKnown RBP2.9□□□□□ -1.95
snR43snR43 IRA1P18963 3092 aa2.9□□□□□ -1.95
snR43snR43 FKS1P38631 1876 aaKnown RBP2.9□□□□□ -1.95
snR43snR43 RAD50P12753 1312 aa2.9□□□□□ -1.95
snR43snR43 CIT1P00890 479 aa2.89□□□□□ -1.95
snR43snR43 TRP2P00899 507 aaKnown RBP2.89□□□□□ -1.95
snR43snR43 HIS5P07172 385 aa2.89□□□□□ -1.95
snR43snR43 GCR1P07261 785 aa2.89□□□□□ -1.95
snR43snR43 HMG2P12684 1045 aa2.89□□□□□ -1.95
snR43snR43 STI1P15705 589 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
snR43snR43 TPM1P17536 199 aaKnown RBP2.89□□□□□ -1.95
snR43snR43 GLN3P18494 730 aa2.89□□□□□ -1.95
snR43snR43 PRE9P23638 258 aaKnown RBP2.89□□□□□ -1.95
snR43snR43 PRP22P24384 1145 aaKnown RBP2.89□□□□□ -1.95
snR43snR43 PGM1P33401 570 aaKnown RBP2.89□□□□□ -1.95
snR43snR43 GCS1P35197 352 aa2.89□□□□□ -1.95
snR43snR43 CCL1P37366 393 aa2.89□□□□□ -1.95
snR43snR43 KTR4P38131 464 aa2.89□□□□□ -1.95
snR43snR43 RXT2P38255 430 aa2.89□□□□□ -1.95
snR43snR43 EAF5P39995 279 aa2.89□□□□□ -1.95
snR43snR43 FIS1P40515 155 aa2.89□□□□□ -1.95
snR43snR43 VID28P40547 921 aa2.89□□□□□ -1.95
snR43snR43 LEM3P42838 414 aa2.89□□□□□ -1.95
snR43snR43 YGL140CP53120 1219 aa2.89□□□□□ -1.95
snR43snR43 YGR130CP53278 816 aa2.89□□□□□ -1.95
snR43snR43 NCE103P53615 221 aa2.89□□□□□ -1.95
snR43snR43 YLR257WQ06146 321 aaKnown RBP2.89□□□□□ -1.95
snR43snR43 NKP2Q06162 153 aa2.89□□□□□ -1.95
snR43snR43 MRL1Q06815 381 aa2.89□□□□□ -1.95
snR43snR43 SMC5Q08204 1093 aa2.89□□□□□ -1.95
snR43snR43 YIG1Q08956 461 aa2.89□□□□□ -1.95
snR43snR43 YOR022CQ12204 715 aa2.89□□□□□ -1.95
snR43snR43 RIF1P29539 1916 aa2.89□□□□□ -1.95
snR43snR43 YLR422WQ06409 1932 aa2.88□□□□□ -1.95
snR43snR43 COX4P04037 155 aa2.88□□□□□ -1.95
snR43snR43 MET6P05694 767 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 ATP1P07251 545 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 VAS1P07806 1104 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 HCA4P20448 770 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 PEX1P24004 1043 aa2.88□□□□□ -1.95
snR43snR43 RSA4P25382 515 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 RSC6P25632 483 aa2.88□□□□□ -1.95
snR43snR43 CDC48P25694 835 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 RAD27P26793 382 aa2.88□□□□□ -1.95
snR43snR43 IMP2'P32351 346 aa2.88□□□□□ -1.95
snR43snR43 DPH2P32461 534 aa2.88□□□□□ -1.95
snR43snR43 VPH1P32563 840 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 CSE2P33308 149 aa2.88□□□□□ -1.95
snR43snR43 HMT1P38074 348 aa2.88□□□□□ -1.95
snR43snR43 MRX3P38172 270 aa2.88□□□□□ -1.95
snR43snR43 GAA1P39012 614 aa2.88□□□□□ -1.95
snR43snR43 LAM5P43560 674 aa2.88□□□□□ -1.95
snR43snR43 YGL138CP53122 345 aa2.88□□□□□ -1.95
snR43snR43 YGR045CP53229 120 aa2.88□□□□□ -1.95
snR43snR43 RET3P53600 189 aa2.88□□□□□ -1.95
snR43snR43 FAR11P53917 953 aa2.88□□□□□ -1.95
snR43snR43 MFM1Q02783 413 aa2.88□□□□□ -1.95
snR43snR43 NOG1Q02892 647 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 UTP5Q04177 643 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 SVF1Q05515 481 aa2.88□□□□□ -1.95
snR43snR43 FPR4Q06205 392 aaPredicted RBP2.88□□□□□ -1.95
snR43snR43 HDA2Q06629 674 aa2.88□□□□□ -1.95
snR43snR43 NSE1Q07913 336 aa2.88□□□□□ -1.95
snR43snR43 AVO1Q08236 1176 aa2.88□□□□□ -1.95
snR43snR43 YOR223WQ12015 292 aa2.88□□□□□ -1.95
snR43snR43 SPE3Q12074 293 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 PKH2Q12236 1081 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 MEX67Q99257 599 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 GCN1P33892 2672 aaKnown RBP2.88□□□□□ -1.95
snR43snR43 HAP2P06774 265 aa2.87□□□□□ -1.95
snR43snR43 SPE1P08432 466 aa2.87□□□□□ -1.95
snR43snR43 CLN3P13365 580 aa2.87□□□□□ -1.95
snR43snR43 CYS3P31373 394 aaKnown RBP2.87□□□□□ -1.95
snR43snR43 ASF1P32447 279 aa2.87□□□□□ -1.95
snR43snR43 SFA1P32771 386 aa2.87□□□□□ -1.95
snR43snR43 PRS1P32895 427 aaKnown RBP2.87□□□□□ -1.95
snR43snR43 COY1P34237 679 aa2.87□□□□□ -1.95
snR43snR43 SEG2P34250 1132 aa2.87□□□□□ -1.95
snR43snR43 PCI8P40512 444 aa2.87□□□□□ -1.95
snR43snR43 ARI1P53111 347 aaKnown RBP2.87□□□□□ -1.95
snR43snR43 MNP1P53163 194 aaPredicted RBP2.87□□□□□ -1.95
snR43snR43 DIP5P53388 608 aa2.87□□□□□ -1.95
snR43snR43 BNI5P53890 448 aaKnown RBP2.87□□□□□ -1.95
snR43snR43 LEE1Q02799 301 aaKnown RBP2.87□□□□□ -1.95
snR43snR43 AIM33Q04516 312 aa2.87□□□□□ -1.95
snR43snR43 YML053CQ04978 212 aa2.87□□□□□ -1.95
snR43snR43 ECM7Q06200 448 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms