RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH49, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH49	YOR319W	NPY1	P53164	384 aa		4.63	□□□□□ -1.67
HSH49	YOR319W	PTA1	Q01329	785 aa	Predicted RBP	4.63	□□□□□ -1.67
HSH49	YOR319W	YDL121C	Q07541	149 aa		4.63	□□□□□ -1.67
HSH49	YOR319W	HAL9	Q12180	1030 aa		4.63	□□□□□ -1.67
HSH49	YOR319W	PPR1	P07272	904 aa	Predicted RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	PTP2	P29461	750 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	YKL133C	P36066	463 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	YKR051W	P36142	418 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	RIM4	P38741	713 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	IES5	P40060	125 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	VHR1	P40522	640 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	YFL052W	P43551	465 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	RSC8	P43609	557 aa	Known RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	BNA2	P47125	453 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	TAN1	P53072	289 aa	Predicted RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	YGR021W	P53212	290 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	PAP2	P53632	584 aa	Known RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	DUS1	P53759	423 aa	Known RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	SKY1	Q03656	742 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	DLT1	Q04216	342 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	ECM16	Q04217	1267 aa	Known RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	CRR1	Q05790	422 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	RPN7	Q06103	429 aa	Known RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	MLC2	Q06580	163 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	PEX15	Q08215	383 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	THI21	Q08975	551 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	RRP6	Q12149	733 aa	Known RBP	4.62	□□□□□ -1.67
HSH49	YOR319W	YOR022C	Q12204	715 aa		4.62	□□□□□ -1.67
HSH49	YOR319W	HEM12	P32347	362 aa	Predicted RBP	4.61	□□□□□ -1.67
HSH49	YOR319W	DAL3	P32459	195 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	NGG1	P32494	702 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	YKR018C	P36114	725 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	MAL31	P38156	614 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	RPP1	P38786	293 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	PZF1	P39933	429 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	SLD3	P53135	668 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	SPC105	P53148	917 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	TIM44	Q01852	431 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	PKH1	Q03407	766 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	YMR206W	Q03695	313 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	OMS1	Q06668	471 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	HFI1	Q12060	488 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	YPR027C	Q12079	277 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	ACF2	Q12168	779 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	TRM13	Q12383	476 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	NKP1	Q12493	238 aa		4.61	□□□□□ -1.67
HSH49	YOR319W	GAL1	P04385	528 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	COX11	P19516	300 aa	Known RBP	4.6	□□□□□ -1.67
HSH49	YOR319W	KCC4	P25389	1037 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	PTH2	P34222	208 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	OAF3	P36023	863 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	RRP8	P38961	392 aa	Known RBP	4.6	□□□□□ -1.67
HSH49	YOR319W	HXT6	P39003	570 aa	Known RBP	4.6	□□□□□ -1.67
HSH49	YOR319W	HXT7	P39004	570 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	ELO3	P40319	345 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	FKH2	P41813	862 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	ZIP2	P53061	704 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	PCL10	P53124	433 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	ASI2	P53895	289 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	YHM2	Q04013	314 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	MCH5	Q08777	521 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	YLR149C	Q99296	730 aa		4.6	□□□□□ -1.67
HSH49	YOR319W	CAF20	P12962	161 aa	Known RBP	4.59	□□□□□ -1.67
HSH49	YOR319W	SAK1	P38990	1142 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	STU2	P46675	888 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	SSY5	P47002	699 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	BFA1	P47113	574 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	RNR4	P49723	345 aa	Known RBP	4.59	□□□□□ -1.67
HSH49	YOR319W	STB4	P50104	949 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	FRE5	Q08908	694 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	DCS2	Q12123	353 aa		4.59	□□□□□ -1.67
HSH49	YOR319W	RPS21A	P0C0V8	87 aa	Known RBP	4.58	□□□□□ -1.68
HSH49	YOR319W	PRP4	P20053	465 aa	Known RBP	4.58	□□□□□ -1.68
HSH49	YOR319W	MRS6	P32864	603 aa	Known RBP	4.58	□□□□□ -1.68
HSH49	YOR319W	MUS81	Q04149	632 aa	Predicted RBP	4.58	□□□□□ -1.68
HSH49	YOR319W	TMA64	Q04600	565 aa	Known RBP	4.58	□□□□□ -1.68
HSH49	YOR319W	RPS21B	Q3E754	87 aa	Known RBP	4.58	□□□□□ -1.68
HSH49	YOR319W	Q0142	Q9ZZW4	58 aa		4.58	□□□□□ -1.68
HSH49	YOR319W	SEC65	P29478	273 aa		4.57	□□□□□ -1.68
HSH49	YOR319W	SER1	P33330	395 aa	Known RBP	4.57	□□□□□ -1.68
HSH49	YOR319W	ATF1	P40353	525 aa		4.57	□□□□□ -1.68
HSH49	YOR319W	YJR039W	P47107	1121 aa		4.57	□□□□□ -1.68
HSH49	YOR319W	MUP1	P50276	574 aa		4.57	□□□□□ -1.68
HSH49	YOR319W	TMN2	Q04562	672 aa		4.57	□□□□□ -1.68
HSH49	YOR319W	SWI6	P09959	803 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	HCA4	P20448	770 aa	Known RBP	4.56	□□□□□ -1.68
HSH49	YOR319W	YKU70	P32807	602 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	MNN4	P36044	1178 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	YKR075C	P36155	307 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	SSZ1	P38788	538 aa	Known RBP	4.56	□□□□□ -1.68
HSH49	YOR319W	QRI1	P43123	477 aa	Known RBP	4.56	□□□□□ -1.68
HSH49	YOR319W	AMA1	P50082	593 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	MRPS35	P53292	345 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	CNM67	P53865	581 aa	Known RBP	4.56	□□□□□ -1.68
HSH49	YOR319W	MUK1	Q02866	612 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	NRG1	Q03125	231 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	ADY4	Q05955	493 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	PSR2	Q07949	397 aa		4.56	□□□□□ -1.68
HSH49	YOR319W	YLR415C	O13578	112 aa		4.55	□□□□□ -1.68
HSH49	YOR319W	PFA3	P42836	336 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms