RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W MDE1P47095 244 aa2.16□□□□□ -2.06
HER1YOR227W PEX13P80667 386 aa2.16□□□□□ -2.06
HER1YOR227W VHS3Q08438 674 aa2.16□□□□□ -2.06
HER1YOR227W VPS13Q07878 3144 aa2.16□□□□□ -2.06
HER1YOR227W PRT1P06103 763 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W CDC26P14724 124 aa2.16□□□□□ -2.06
HER1YOR227W GUK1P15454 187 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W SYP1P25623 870 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W STE13P33894 931 aa2.16□□□□□ -2.06
HER1YOR227W JNM1P36224 373 aa2.16□□□□□ -2.06
HER1YOR227W LAM1P38851 1228 aa2.16□□□□□ -2.06
HER1YOR227W VHR1P40522 640 aa2.16□□□□□ -2.06
HER1YOR227W NAS2P40555 220 aa2.16□□□□□ -2.06
HER1YOR227W ENV11P53246 860 aa2.16□□□□□ -2.06
HER1YOR227W NCE103P53615 221 aa2.16□□□□□ -2.06
HER1YOR227W ATP25Q03153 612 aa2.16□□□□□ -2.06
HER1YOR227W SRC1Q03707 834 aa2.16□□□□□ -2.06
HER1YOR227W PHR1P05066 565 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
HER1YOR227W CDC16P09798 840 aa2.16□□□□□ -2.06
HER1YOR227W MTF2P10849 440 aa2.16□□□□□ -2.06
HER1YOR227W NEM1P38757 446 aa2.16□□□□□ -2.06
HER1YOR227W AIM46P38885 310 aa2.16□□□□□ -2.06
HER1YOR227W TOK1P40310 691 aa2.16□□□□□ -2.06
HER1YOR227W AXL1P40851 1208 aa2.16□□□□□ -2.06
HER1YOR227W YJL055WP47044 245 aa2.16□□□□□ -2.06
HER1YOR227W PAP2P53632 584 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W SRT1Q03175 343 aa2.16□□□□□ -2.06
HER1YOR227W RCF1Q03713 159 aa2.16□□□□□ -2.06
HER1YOR227W SPO71Q03868 1245 aa2.16□□□□□ -2.06
HER1YOR227W PMT7Q06644 662 aa2.16□□□□□ -2.06
HER1YOR227W GAS5Q08193 484 aa2.16□□□□□ -2.06
HER1YOR227W GLO4Q12320 285 aa2.16□□□□□ -2.06
HER1YOR227W SWI6P09959 803 aa2.15□□□□□ -2.06
HER1YOR227W RED1P14291 827 aa2.15□□□□□ -2.06
HER1YOR227W HOG1P32485 435 aa2.15□□□□□ -2.06
HER1YOR227W VPS41P38959 992 aa2.15□□□□□ -2.06
HER1YOR227W PNT1P38969 423 aa2.15□□□□□ -2.06
HER1YOR227W GCD10P41814 478 aa2.15□□□□□ -2.06
HER1YOR227W RSM26P47141 266 aa2.15□□□□□ -2.06
HER1YOR227W MSN5P52918 1224 aa2.15□□□□□ -2.06
HER1YOR227W SAS4Q04003 481 aa2.15□□□□□ -2.06
HER1YOR227W UTP5Q04177 643 aaKnown RBP2.15□□□□□ -2.06
HER1YOR227W SKG3Q06315 1026 aa2.15□□□□□ -2.06
HER1YOR227W GYP1Q08484 637 aa2.15□□□□□ -2.06
HER1YOR227W NSI1Q12457 570 aa2.15□□□□□ -2.06
HER1YOR227W ISN1Q99312 450 aa2.15□□□□□ -2.06
HER1YOR227W LEU1P07264 779 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W CAF20P12962 161 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W DAT1P13483 248 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W SUI2P20459 304 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W OLE1P21147 510 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W YKL107WP34251 309 aa2.15□□□□□ -2.07
HER1YOR227W MAC1P35192 417 aa2.15□□□□□ -2.07
HER1YOR227W OAF3P36023 863 aa2.15□□□□□ -2.07
HER1YOR227W IFA38P38286 347 aa2.15□□□□□ -2.07
HER1YOR227W RTR1P40084 226 aaPredicted RBP2.15□□□□□ -2.07
HER1YOR227W FMP10P40098 244 aa2.15□□□□□ -2.07
HER1YOR227W CNN1P43618 361 aa2.15□□□□□ -2.07
HER1YOR227W JJJ2P46997 583 aa2.15□□□□□ -2.07
HER1YOR227W HAP5Q02516 242 aa2.15□□□□□ -2.07
HER1YOR227W CUS1Q02554 436 aaPredicted RBP2.15□□□□□ -2.07
HER1YOR227W SKY1Q03656 742 aa2.15□□□□□ -2.07
HER1YOR227W GUD1Q07729 489 aa2.15□□□□□ -2.07
HER1YOR227W PEX15Q08215 383 aa2.15□□□□□ -2.07
HER1YOR227W RRG1Q12167 365 aaPredicted RBP2.15□□□□□ -2.07
HER1YOR227W RMP1Q12530 201 aa2.15□□□□□ -2.07
HER1YOR227W LPD1P09624 499 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W PFK1P16861 987 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W DAL7P21826 554 aa2.15□□□□□ -2.07
HER1YOR227W ADP1P25371 1049 aa2.15□□□□□ -2.07
HER1YOR227W DOM34P33309 386 aa2.15□□□□□ -2.07
HER1YOR227W VRP1P37370 817 aa2.15□□□□□ -2.07
HER1YOR227W UBS1P38290 277 aa2.15□□□□□ -2.07
HER1YOR227W YBR225WP38321 900 aa2.15□□□□□ -2.07
HER1YOR227W TIF4631P39935 952 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W EAF5P39995 279 aa2.15□□□□□ -2.07
HER1YOR227W FIR1P40020 876 aa2.15□□□□□ -2.07
HER1YOR227W CIT3P43635 486 aa2.15□□□□□ -2.07
HER1YOR227W SAE2P46946 345 aa2.15□□□□□ -2.07
HER1YOR227W ARH1P48360 493 aa2.15□□□□□ -2.07
HER1YOR227W RBG2P53295 368 aaKnown RBP2.15□□□□□ -2.07
HER1YOR227W DFG5Q05031 458 aa2.15□□□□□ -2.07
HER1YOR227W OMS1Q06668 471 aa2.15□□□□□ -2.07
HER1YOR227W ALE1Q08548 619 aa2.15□□□□□ -2.07
HER1YOR227W ENV7Q12003 364 aa2.15□□□□□ -2.07
HER1YOR227W DCS2Q12123 353 aa2.15□□□□□ -2.07
HER1YOR227W SPO21Q12411 609 aa2.15□□□□□ -2.07
HER1YOR227W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
HER1YOR227W DAL1P32375 460 aa2.14□□□□□ -2.07
HER1YOR227W MKS1P34072 584 aa2.14□□□□□ -2.07
HER1YOR227W MTH1P35198 433 aa2.14□□□□□ -2.07
HER1YOR227W TBS1P38114 1094 aa2.14□□□□□ -2.07
HER1YOR227W STB5P38699 743 aa2.14□□□□□ -2.07
HER1YOR227W PUG1P40100 303 aa2.14□□□□□ -2.07
HER1YOR227W SLS1P42900 643 aa2.14□□□□□ -2.07
HER1YOR227W PTK2P47116 818 aaKnown RBP2.14□□□□□ -2.07
HER1YOR227W YKE2P52553 114 aa2.14□□□□□ -2.07
HER1YOR227W YBP2P53169 641 aa2.14□□□□□ -2.07
HER1YOR227W TEP1P53916 434 aa2.14□□□□□ -2.07
HER1YOR227W VID22Q05934 901 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms