RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	ATG33	Q06485	197 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	YLR001C	Q07895	862 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	TRZ1	P36159	838 aa	Predicted RBP	4.2	□□□□□ -1.74
TSR4	YOL022C	PCM1	P38628	557 aa	Known RBP	4.2	□□□□□ -1.74
TSR4	YOL022C	ATG36	P46983	293 aa		4.2	□□□□□ -1.74
TSR4	YOL022C	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
TSR4	YOL022C	CCR4	P31384	837 aa	Known RBP	4.19	□□□□□ -1.74
TSR4	YOL022C	UBS1	P38290	277 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	NUP60	P39705	539 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	CCT7	P42943	550 aa	Known RBP	4.19	□□□□□ -1.74
TSR4	YOL022C	AIM14	P53109	570 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	FHN1	P53279	174 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	YAP1802	P53309	568 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	BRE5	P53741	515 aa	Known RBP	4.19	□□□□□ -1.74
TSR4	YOL022C	YNL193W	P53870	558 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	SSL2	Q00578	843 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	CTK1	Q03957	528 aa	Known RBP	4.19	□□□□□ -1.74
TSR4	YOL022C	TAF3	Q12297	353 aa		4.19	□□□□□ -1.74
TSR4	YOL022C	PYC1	P11154	1178 aa	Known RBP	4.18	□□□□□ -1.74
TSR4	YOL022C	RNR1	P21524	888 aa	Known RBP	4.18	□□□□□ -1.74
TSR4	YOL022C	APT2	P36973	181 aa		4.18	□□□□□ -1.74
TSR4	YOL022C	SFB3	P38810	929 aa		4.18	□□□□□ -1.74
TSR4	YOL022C	REV7	P38927	245 aa		4.18	□□□□□ -1.74
TSR4	YOL022C	YJR008W	P47085	338 aa		4.18	□□□□□ -1.74
TSR4	YOL022C	HLJ1	P48353	224 aa		4.18	□□□□□ -1.74
TSR4	YOL022C	VPS73	P53142	486 aa	Known RBP	4.18	□□□□□ -1.74
TSR4	YOL022C	YKL033W-A	Q86ZR7	236 aa		4.18	□□□□□ -1.74
TSR4	YOL022C	SFL1	P20134	766 aa		4.17	□□□□□ -1.74
TSR4	YOL022C	MVD1	P32377	396 aa	Known RBP	4.17	□□□□□ -1.74
TSR4	YOL022C	TDP1	P38319	544 aa		4.17	□□□□□ -1.74
TSR4	YOL022C	NOP9	P47077	666 aa	Known RBP	4.17	□□□□□ -1.74
TSR4	YOL022C	TAH11	P47112	604 aa		4.17	□□□□□ -1.74
TSR4	YOL022C	REC102	Q02721	264 aa		4.17	□□□□□ -1.74
TSR4	YOL022C	MLH3	Q12083	715 aa		4.17	□□□□□ -1.74
TSR4	YOL022C	PHO11	P35842	467 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	MNN4	P36044	1178 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	CBR1	P38626	284 aa	Known RBP	4.16	□□□□□ -1.74
TSR4	YOL022C	PHO12	P38693	467 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	SSZ1	P38788	538 aa	Known RBP	4.16	□□□□□ -1.74
TSR4	YOL022C	DOT6	P40059	670 aa	Known RBP	4.16	□□□□□ -1.74
TSR4	YOL022C	ATF1	P40353	525 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	NDC80	P40460	691 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	YJR039W	P47107	1121 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	YGR237C	P50089	785 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	THI73	Q07904	523 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	DCS2	Q12123	353 aa		4.16	□□□□□ -1.74
TSR4	YOL022C	THR1	P17423	357 aa	Known RBP	4.15	□□□□□ -1.75
TSR4	YOL022C	KIN3	P22209	435 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	PEX1	P24004	1043 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	SEC6	P32844	805 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	PAF1	P38351	445 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	YNL195C	P40168	261 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	SET2	P46995	733 aa	Known RBP	4.15	□□□□□ -1.75
TSR4	YOL022C	PMT3	P47190	753 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	MET13	P53128	600 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	THI22	Q06490	572 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	GIN4	Q12263	1142 aa		4.15	□□□□□ -1.75
TSR4	YOL022C	BNR1	P40450	1375 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	GFA1	P14742	717 aa	Known RBP	4.14	□□□□□ -1.75
TSR4	YOL022C	YPT7	P32939	208 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	AKL1	P38080	1108 aa	Known RBP	4.14	□□□□□ -1.75
TSR4	YOL022C	APN2	P38207	520 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	YJL206C	P39529	758 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	MGS1	P40151	587 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	GPG1	P53130	126 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	RTS3	P53289	263 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	SDA1	P53313	767 aa	Known RBP	4.14	□□□□□ -1.75
TSR4	YOL022C	UME1	Q03010	460 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	ECM3	Q99252	613 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	NUP145	P49687	1317 aa		4.14	□□□□□ -1.75
TSR4	YOL022C	CDC43	P18898	376 aa		4.13	□□□□□ -1.75
TSR4	YOL022C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
TSR4	YOL022C	BEM4	P39011	633 aa		4.13	□□□□□ -1.75
TSR4	YOL022C	ARG2	P40360	574 aa		4.13	□□□□□ -1.75
TSR4	YOL022C	RSC8	P43609	557 aa	Known RBP	4.13	□□□□□ -1.75
TSR4	YOL022C	FOL1	P53848	824 aa		4.13	□□□□□ -1.75
TSR4	YOL022C	ATG4	P53867	494 aa		4.13	□□□□□ -1.75
TSR4	YOL022C	YML122C	Q03207	126 aa		4.13	□□□□□ -1.75
TSR4	YOL022C	MRC1	P25588	1096 aa		4.12	□□□□□ -1.75
TSR4	YOL022C	EMP70	P32802	667 aa		4.12	□□□□□ -1.75
TSR4	YOL022C	CUE2	P36075	443 aa	Known RBP	4.12	□□□□□ -1.75
TSR4	YOL022C	SET3	P36124	751 aa		4.12	□□□□□ -1.75
TSR4	YOL022C	TYS1	P36421	394 aa	Known RBP	4.12	□□□□□ -1.75
TSR4	YOL022C	BDH2	P39713	417 aa		4.12	□□□□□ -1.75
TSR4	YOL022C	NUG1	P40010	520 aa	Known RBP	4.12	□□□□□ -1.75
TSR4	YOL022C	ZRT2	Q12436	422 aa		4.12	□□□□□ -1.75
TSR4	YOL022C	TMA17	Q12513	150 aa		4.12	□□□□□ -1.75
TSR4	YOL022C	HCA4	P20448	770 aa	Known RBP	4.11	□□□□□ -1.75
TSR4	YOL022C	DMC1	P25453	334 aa		4.11	□□□□□ -1.75
TSR4	YOL022C	BCS1	P32839	456 aa		4.11	□□□□□ -1.75
TSR4	YOL022C	FLO10	P36170	1169 aa		4.11	□□□□□ -1.75
TSR4	YOL022C	ENP1	P38333	483 aa	Known RBP	4.11	□□□□□ -1.75
TSR4	YOL022C	BIT2	P38346	545 aa		4.11	□□□□□ -1.75
TSR4	YOL022C	COX18	P53239	316 aa		4.11	□□□□□ -1.75
TSR4	YOL022C	USV1	Q12132	391 aa		4.11	□□□□□ -1.75
TSR4	YOL022C	CLF1	Q12309	687 aa	Predicted RBP	4.11	□□□□□ -1.75
TSR4	YOL022C	ADY2	P25613	283 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	GLG1	P36143	616 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	YIL166C	P40445	542 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	GPP1	P41277	250 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms