RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W GIS1Q03833 894 aa4.37□□□□□ -1.71
PUB1YNL016W EIS1Q05050 843 aaKnown RBP4.37□□□□□ -1.71
PUB1YNL016W BLS1Q06071 122 aa4.37□□□□□ -1.71
PUB1YNL016W EST2Q06163 884 aa4.37□□□□□ -1.71
PUB1YNL016W ATG33Q06485 197 aa4.37□□□□□ -1.71
PUB1YNL016W YDR306CQ06640 478 aa4.37□□□□□ -1.71
PUB1YNL016W RSC58Q07979 502 aa4.37□□□□□ -1.71
PUB1YNL016W RRG1Q12167 365 aaPredicted RBP4.37□□□□□ -1.71
PUB1YNL016W YOL114CQ12322 202 aa4.37□□□□□ -1.71
PUB1YNL016W YPR071WQ12346 211 aa4.37□□□□□ -1.71
PUB1YNL016W FLO11P08640 1367 aa4.36□□□□□ -1.71
PUB1YNL016W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
PUB1YNL016W CBP1P07252 654 aa4.36□□□□□ -1.71
PUB1YNL016W HMG1P12683 1054 aa4.36□□□□□ -1.71
PUB1YNL016W SAN1P22470 610 aa4.36□□□□□ -1.71
PUB1YNL016W CDC60P26637 1090 aaKnown RBP4.36□□□□□ -1.71
PUB1YNL016W AAR2P32357 355 aaPredicted RBP4.36□□□□□ -1.71
PUB1YNL016W HOG1P32485 435 aa4.36□□□□□ -1.71
PUB1YNL016W SHM1P37292 490 aaPredicted RBP4.36□□□□□ -1.71
PUB1YNL016W NOP16P40007 231 aaKnown RBP4.36□□□□□ -1.71
PUB1YNL016W YTA6P40328 754 aa4.36□□□□□ -1.71
PUB1YNL016W GPD2P41911 440 aaKnown RBP4.36□□□□□ -1.71
PUB1YNL016W JJJ2P46997 583 aa4.36□□□□□ -1.71
PUB1YNL016W YML6P51998 286 aa4.36□□□□□ -1.71
PUB1YNL016W SKP1P52286 194 aa4.36□□□□□ -1.71
PUB1YNL016W CEG1Q01159 459 aaPredicted RBP4.36□□□□□ -1.71
PUB1YNL016W YVH1Q02256 364 aaKnown RBP4.36□□□□□ -1.71
PUB1YNL016W NSE5Q03718 556 aa4.36□□□□□ -1.71
PUB1YNL016W ARA2Q04212 335 aa4.36□□□□□ -1.71
PUB1YNL016W SGD1Q06132 899 aa4.36□□□□□ -1.71
PUB1YNL016W GSC2P40989 1895 aa4.36□□□□□ -1.71
PUB1YNL016W ENA1P13587 1091 aa4.35□□□□□ -1.71
PUB1YNL016W SPO16P17122 198 aa4.35□□□□□ -1.71
PUB1YNL016W FPS1P23900 669 aa4.35□□□□□ -1.71
PUB1YNL016W RAD16P31244 790 aa4.35□□□□□ -1.71
PUB1YNL016W PAH1P32567 862 aa4.35□□□□□ -1.71
PUB1YNL016W SLA1P32790 1244 aa4.35□□□□□ -1.71
PUB1YNL016W NPL6P32832 435 aa4.35□□□□□ -1.71
PUB1YNL016W PXA2P34230 853 aa4.35□□□□□ -1.71
PUB1YNL016W YKL100CP34248 587 aa4.35□□□□□ -1.71
PUB1YNL016W DHR2P36009 735 aaPredicted RBP4.35□□□□□ -1.71
PUB1YNL016W MCM7P38132 845 aa4.35□□□□□ -1.71
PUB1YNL016W SSN3P39073 555 aa4.35□□□□□ -1.71
PUB1YNL016W RAD26P40352 1085 aa4.35□□□□□ -1.71
PUB1YNL016W GYP8P43570 497 aa4.35□□□□□ -1.71
PUB1YNL016W IRC6P43615 237 aa4.35□□□□□ -1.71
PUB1YNL016W YGR153WP48238 217 aa4.35□□□□□ -1.71
PUB1YNL016W YGR283CP53336 341 aaPredicted RBP4.35□□□□□ -1.71
PUB1YNL016W ENA2Q01896 1091 aa4.35□□□□□ -1.71
PUB1YNL016W VPS64Q03944 604 aa4.35□□□□□ -1.71
PUB1YNL016W LCD1Q04377 747 aa4.35□□□□□ -1.71
PUB1YNL016W RBA50Q04418 439 aa4.35□□□□□ -1.71
PUB1YNL016W GSF2Q04697 403 aaKnown RBP4.35□□□□□ -1.71
PUB1YNL016W YDR338CQ05497 695 aa4.35□□□□□ -1.71
PUB1YNL016W RRP9Q06506 573 aaKnown RBP4.35□□□□□ -1.71
PUB1YNL016W RSC3Q06639 885 aa4.35□□□□□ -1.71
PUB1YNL016W PSH1Q12161 406 aa4.35□□□□□ -1.71
PUB1YNL016W ENA5Q12691 1091 aa4.35□□□□□ -1.71
PUB1YNL016W APM4Q99186 491 aa4.35□□□□□ -1.71
PUB1YNL016W BI4P03879 638 aa4.34□□□□□ -1.71
PUB1YNL016W DED1P06634 604 aaKnown RBP4.34□□□□□ -1.71
PUB1YNL016W LEU1P07264 779 aaKnown RBP4.34□□□□□ -1.71
PUB1YNL016W IDI1P15496 288 aa4.34□□□□□ -1.71
PUB1YNL016W RGP1P16664 663 aa4.34□□□□□ -1.71
PUB1YNL016W SEC18P18759 758 aaKnown RBP4.34□□□□□ -1.71
PUB1YNL016W AAD3P25612 363 aa4.34□□□□□ -1.71
PUB1YNL016W KRE2P27809 442 aa4.34□□□□□ -1.71
PUB1YNL016W AFR1P33304 620 aa4.34□□□□□ -1.71
PUB1YNL016W MCD4P36051 919 aa4.34□□□□□ -1.71
PUB1YNL016W ABZ1P37254 787 aaPredicted RBP4.34□□□□□ -1.71
PUB1YNL016W RXT2P38255 430 aa4.34□□□□□ -1.71
PUB1YNL016W LRP1P38801 184 aaKnown RBP4.34□□□□□ -1.71
PUB1YNL016W RET2P43621 546 aa4.34□□□□□ -1.71
PUB1YNL016W YAP1802P53309 568 aa4.34□□□□□ -1.71
PUB1YNL016W CUS1Q02554 436 aaPredicted RBP4.34□□□□□ -1.71
PUB1YNL016W TAF11Q04226 346 aa4.34□□□□□ -1.71
PUB1YNL016W HLR1Q04429 423 aa4.34□□□□□ -1.71
PUB1YNL016W YLR287CQ05881 355 aa4.34□□□□□ -1.71
PUB1YNL016W VHS3Q08438 674 aa4.34□□□□□ -1.71
PUB1YNL016W GUP2Q08929 609 aa4.34□□□□□ -1.71
PUB1YNL016W YPL191CQ08930 360 aa4.34□□□□□ -1.71
PUB1YNL016W GNT1Q12096 491 aa4.34□□□□□ -1.71
PUB1YNL016W GLO4Q12320 285 aa4.34□□□□□ -1.71
PUB1YNL016W TY1A-DR3Q12441 440 aa4.34□□□□□ -1.71
PUB1YNL016W NAT1P12945 854 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W PDC5P16467 563 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W HOP1P20050 605 aa4.33□□□□□ -1.72
PUB1YNL016W CMK1P27466 446 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W KNS1P32350 737 aaPredicted RBP4.33□□□□□ -1.72
PUB1YNL016W SEG2P34250 1132 aa4.33□□□□□ -1.72
PUB1YNL016W ADD66P36040 267 aa4.33□□□□□ -1.72
PUB1YNL016W MUD2P36084 527 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W SHM2P37291 469 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W UBS1P38290 277 aa4.33□□□□□ -1.72
PUB1YNL016W RGD1P38339 666 aa4.33□□□□□ -1.72
PUB1YNL016W HXT6P39003 570 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W HXT7P39004 570 aa4.33□□□□□ -1.72
PUB1YNL016W TOK1P40310 691 aa4.33□□□□□ -1.72
PUB1YNL016W RIC1P40395 1056 aa4.33□□□□□ -1.72
PUB1YNL016W GSM1P42950 618 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms