RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	SET2	P46995	733 aa	Known RBP	3.5	□□□□□ -1.85
PKR1	YMR123W	YJR039W	P47107	1121 aa		3.5	□□□□□ -1.85
PKR1	YMR123W	BRE5	P53741	515 aa	Known RBP	3.5	□□□□□ -1.85
PKR1	YMR123W	YNL193W	P53870	558 aa		3.5	□□□□□ -1.85
PKR1	YMR123W	TFB2	Q02939	513 aa		3.5	□□□□□ -1.85
PKR1	YMR123W	KIN3	P22209	435 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	DMC1	P25453	334 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	PPG1	P32838	368 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	MNN4	P36044	1178 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	SSZ1	P38788	538 aa	Known RBP	3.49	□□□□□ -1.85
PKR1	YMR123W	CRP1	P38845	465 aa	Known RBP	3.49	□□□□□ -1.85
PKR1	YMR123W	ARG2	P40360	574 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	NDC80	P40460	691 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	NOP9	P47077	666 aa	Known RBP	3.49	□□□□□ -1.85
PKR1	YMR123W	VPS73	P53142	486 aa	Known RBP	3.49	□□□□□ -1.85
PKR1	YMR123W	DCS2	Q12123	353 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	SUT2	Q12286	268 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	TAF3	Q12297	353 aa		3.49	□□□□□ -1.85
PKR1	YMR123W	NOP14	Q99207	810 aa	Known RBP	3.49	□□□□□ -1.85
PKR1	YMR123W	HCA4	P20448	770 aa	Known RBP	3.48	□□□□□ -1.85
PKR1	YMR123W	PHO11	P35842	467 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	TDP1	P38319	544 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	PHO12	P38693	467 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	NMD2	P38798	1089 aa	Known RBP	3.48	□□□□□ -1.85
PKR1	YMR123W	YJL206C	P39529	758 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	MGS1	P40151	587 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	ATF1	P40353	525 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	CCT7	P42943	550 aa	Known RBP	3.48	□□□□□ -1.85
PKR1	YMR123W	TAH11	P47112	604 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	MET13	P53128	600 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	ATG4	P53867	494 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	RGC1	Q06108	1083 aa	Known RBP	3.48	□□□□□ -1.85
PKR1	YMR123W	THI22	Q06490	572 aa		3.48	□□□□□ -1.85
PKR1	YMR123W	SEC6	P32844	805 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	AKL1	P38080	1108 aa	Known RBP	3.47	□□□□□ -1.85
PKR1	YMR123W	BDH2	P39713	417 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	RSC8	P43609	557 aa	Known RBP	3.47	□□□□□ -1.85
PKR1	YMR123W	COX18	P53239	316 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	GPD1	Q00055	391 aa	Known RBP	3.47	□□□□□ -1.85
PKR1	YMR123W	GUD1	Q07729	489 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	DIA2	Q08496	732 aa	Predicted RBP	3.47	□□□□□ -1.85
PKR1	YMR123W	MLH3	Q12083	715 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	ZRT2	Q12436	422 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	ECM3	Q99252	613 aa		3.47	□□□□□ -1.85
PKR1	YMR123W	RPL8A	P17076	256 aa	Known RBP	3.46	□□□□□ -1.86
PKR1	YMR123W	THR1	P17423	357 aa	Known RBP	3.46	□□□□□ -1.86
PKR1	YMR123W	PRP28	P23394	588 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	GLG1	P36143	616 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	MAL31	P38156	614 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	UBS1	P38290	277 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	BIT2	P38346	545 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	BEM4	P39011	633 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	MNN1	P39106	762 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	NUG1	P40010	520 aa	Known RBP	3.46	□□□□□ -1.86
PKR1	YMR123W	PIG2	P40187	538 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	YIL166C	P40445	542 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	CTR1	P49573	406 aa		3.46	□□□□□ -1.86
PKR1	YMR123W	UTP14	Q04500	899 aa	Known RBP	3.46	□□□□□ -1.86
PKR1	YMR123W	ILV6	P25605	309 aa	Known RBP	3.45	□□□□□ -1.86
PKR1	YMR123W	SFP1	P32432	683 aa		3.45	□□□□□ -1.86
PKR1	YMR123W	YPT7	P32939	208 aa		3.45	□□□□□ -1.86
PKR1	YMR123W	CUE2	P36075	443 aa	Known RBP	3.45	□□□□□ -1.86
PKR1	YMR123W	YNL195C	P40168	261 aa		3.45	□□□□□ -1.86
PKR1	YMR123W	SDA1	P53313	767 aa	Known RBP	3.45	□□□□□ -1.86
PKR1	YMR123W	ISA1	Q07821	250 aa	Predicted RBP	3.45	□□□□□ -1.86
PKR1	YMR123W	ERG20	P08524	352 aa	Known RBP	3.44	□□□□□ -1.86
PKR1	YMR123W	BCS1	P32839	456 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	YHR202W	P38887	602 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	RET2	P43621	546 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	YML122C	Q03207	126 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	CHS5	Q12114	671 aa	Known RBP	3.44	□□□□□ -1.86
PKR1	YMR123W	USV1	Q12132	391 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	NDJ1	Q12366	352 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	POM34	Q12445	299 aa		3.44	□□□□□ -1.86
PKR1	YMR123W	BNR1	P40450	1375 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	TUB1	P09733	447 aa	Known RBP	3.43	□□□□□ -1.86
PKR1	YMR123W	ABF1	P14164	731 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	ADY2	P25613	283 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	FEN2	P25621	512 aa	Known RBP	3.43	□□□□□ -1.86
PKR1	YMR123W	PET127	P32606	800 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	EMP70	P32802	667 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	SET3	P36124	751 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	YKR075C	P36155	307 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	APM1	Q00776	475 aa	Predicted RBP	3.43	□□□□□ -1.86
PKR1	YMR123W	VPS36	Q06696	566 aa		3.43	□□□□□ -1.86
PKR1	YMR123W	RPN13	O13563	156 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	FRS1	P15624	595 aa	Known RBP	3.42	□□□□□ -1.86
PKR1	YMR123W	IMG2	P25642	146 aa	Predicted RBP	3.42	□□□□□ -1.86
PKR1	YMR123W	FUB1	P25659	250 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	PPZ2	P33329	710 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	RIX1	P38883	763 aa	Predicted RBP	3.42	□□□□□ -1.86
PKR1	YMR123W	CKB2	P38930	258 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	YEL020C	P39994	560 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	BIT61	P47041	543 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	YJR096W	P47137	282 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	DNM1	P54861	757 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	ARO10	Q06408	635 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	VHS3	Q08438	674 aa		3.42	□□□□□ -1.86
PKR1	YMR123W	BMS1	Q08965	1183 aa	Known RBP	3.42	□□□□□ -1.86
PKR1	YMR123W	SWI6	P09959	803 aa		3.41	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms