RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W MRI1Q06489 411 aaKnown RBP12.38□□□□□ -0.43
TCD2YKL027W RAD57P25301 460 aa12.37□□□□□ -0.43
TCD2YKL027W FRE1P32791 686 aa12.37□□□□□ -0.43
TCD2YKL027W YKL050CP35736 922 aa12.37□□□□□ -0.43
TCD2YKL027W CAJ1P39101 391 aa12.37□□□□□ -0.43
TCD2YKL027W FMP10P40098 244 aa12.37□□□□□ -0.43
TCD2YKL027W JSN1P47135 1091 aaKnown RBP RIP-Chip data12.37□□□□□ -0.43not detected
TCD2YKL027W YML083CQ04526 418 aa12.37□□□□□ -0.43
TCD2YKL027W TAF10Q12030 206 aa12.37□□□□□ -0.43
TCD2YKL027W STO1P34160 861 aaKnown RBP12.37□□□□□ -0.43
TCD2YKL027W SET5P38890 526 aaKnown RBP12.37□□□□□ -0.43
TCD2YKL027W EFM4P40516 257 aa12.37□□□□□ -0.43
TCD2YKL027W STU2P46675 888 aa12.37□□□□□ -0.43
TCD2YKL027W NUT1P53114 1132 aa12.37□□□□□ -0.43
TCD2YKL027W GPD1Q00055 391 aaKnown RBP12.37□□□□□ -0.43
TCD2YKL027W MUB1Q03162 620 aa12.37□□□□□ -0.43
TCD2YKL027W YMR018WQ04364 514 aa12.37□□□□□ -0.43
TCD2YKL027W ERV41Q04651 352 aa12.37□□□□□ -0.43
TCD2YKL027W SOV1Q04748 898 aa12.37□□□□□ -0.43
TCD2YKL027W ESC2Q06340 456 aa12.37□□□□□ -0.43
TCD2YKL027W JIP3O13555 125 aa12.36□□□□□ -0.43
TCD2YKL027W SAT4P25333 603 aaKnown RBP12.36□□□□□ -0.43
TCD2YKL027W BLI1P35727 113 aa12.36□□□□□ -0.43
TCD2YKL027W APT1P49435 187 aaKnown RBP12.36□□□□□ -0.43
TCD2YKL027W PUS2P53167 370 aa12.36□□□□□ -0.43
TCD2YKL027W YGR111WP53265 400 aa12.36□□□□□ -0.43
TCD2YKL027W TRE1Q08919 783 aa12.36□□□□□ -0.43
TCD2YKL027W SRB4P32569 687 aa12.35□□□□□ -0.43
TCD2YKL027W RRN6P32786 894 aa12.35□□□□□ -0.43
TCD2YKL027W YBR284WP38150 797 aa12.35□□□□□ -0.43
TCD2YKL027W RGD1P38339 666 aa12.35□□□□□ -0.43
TCD2YKL027W TCD1P38756 429 aa12.35□□□□□ -0.43
TCD2YKL027W TDA3P38758 523 aa12.35□□□□□ -0.43
TCD2YKL027W SEC9P40357 651 aa12.35□□□□□ -0.43
TCD2YKL027W SPO71Q03868 1245 aa12.35□□□□□ -0.43
TCD2YKL027W VMA4P22203 233 aaKnown RBP12.34□□□□□ -0.43
TCD2YKL027W TAF1P46677 1066 aa12.34□□□□□ -0.43
TCD2YKL027W YMR1P47147 688 aaKnown RBP RIP-Chip data12.34□□□□□ -0.43not detected
TCD2YKL027W ADA2Q02336 434 aa12.34□□□□□ -0.43
TCD2YKL027W YDR222WQ04925 415 aa12.34□□□□□ -0.43
TCD2YKL027W GPM2Q12008 311 aa12.34□□□□□ -0.43
TCD2YKL027W MNL2Q12205 849 aa12.34□□□□□ -0.43
TCD2YKL027W APM4Q99186 491 aa12.34□□□□□ -0.43
TCD2YKL027W CKI1P20485 582 aa12.33□□□□□ -0.44
TCD2YKL027W MRP4P32902 394 aa12.33□□□□□ -0.44
TCD2YKL027W TKL2P33315 681 aa12.33□□□□□ -0.44
TCD2YKL027W GCS1P35197 352 aa12.33□□□□□ -0.44
TCD2YKL027W BCH2P36122 765 aa12.33□□□□□ -0.44
TCD2YKL027W STB5P38699 743 aa12.33□□□□□ -0.44
TCD2YKL027W SPC72P39723 622 aa12.33□□□□□ -0.44
TCD2YKL027W TGL3P40308 642 aa12.33□□□□□ -0.44
TCD2YKL027W FAF1P40546 346 aaPredicted RBP12.33□□□□□ -0.44
TCD2YKL027W BFA1P47113 574 aa12.33□□□□□ -0.44
TCD2YKL027W JJJ1P53863 590 aa12.33□□□□□ -0.44
TCD2YKL027W ARO80Q04052 950 aa12.33□□□□□ -0.44
TCD2YKL027W SIL1Q08199 421 aa12.33□□□□□ -0.44
TCD2YKL027W BI2P03873 423 aa12.32□□□□□ -0.44
TCD2YKL027W BI4P03879 638 aa12.32□□□□□ -0.44
TCD2YKL027W RAD27P26793 382 aa12.32□□□□□ -0.44
TCD2YKL027W MET4P32389 672 aa12.32□□□□□ -0.44
TCD2YKL027W GYP6P32806 458 aa12.32□□□□□ -0.44
TCD2YKL027W CBR1P38626 284 aaKnown RBP12.32□□□□□ -0.44
TCD2YKL027W RAD55P38953 406 aa12.32□□□□□ -0.44
TCD2YKL027W YEL075CP39972 122 aa12.32□□□□□ -0.44
TCD2YKL027W APC5Q08683 685 aa12.32□□□□□ -0.44
TCD2YKL027W BI3Q9ZZW7 517 aa12.32□□□□□ -0.44
TCD2YKL027W ERG11P10614 530 aa12.31□□□□□ -0.44
TCD2YKL027W PET123P17558 318 aa12.31□□□□□ -0.44
TCD2YKL027W LRE1P25579 583 aaKnown RBP12.31□□□□□ -0.44
TCD2YKL027W URK1P27515 501 aa12.31□□□□□ -0.44
TCD2YKL027W YBL036CP38197 257 aa12.31□□□□□ -0.44
TCD2YKL027W INP52P50942 1183 aa12.31□□□□□ -0.44
TCD2YKL027W KAP114P53067 1004 aa12.31□□□□□ -0.44
TCD2YKL027W BTN2P53286 410 aa12.31□□□□□ -0.44
TCD2YKL027W YNL011CP53980 444 aa12.31□□□□□ -0.44
TCD2YKL027W VAC14Q06708 880 aa12.31□□□□□ -0.44
TCD2YKL027W YLR001CQ07895 862 aa12.31□□□□□ -0.44
TCD2YKL027W VPS54Q12071 889 aa12.31□□□□□ -0.44
TCD2YKL027W EST1P17214 699 aaPredicted RBP12.3□□□□□ -0.44
TCD2YKL027W PEP7P32609 515 aa12.3□□□□□ -0.44
TCD2YKL027W NCL1P38205 684 aaKnown RBP12.3□□□□□ -0.44
TCD2YKL027W QNS1P38795 714 aaKnown RBP12.3□□□□□ -0.44
TCD2YKL027W YNL034WP53963 612 aa12.3□□□□□ -0.44
TCD2YKL027W YNL018CP53976 612 aa12.3□□□□□ -0.44
TCD2YKL027W NGL3Q03210 505 aa12.3□□□□□ -0.44
TCD2YKL027W SXM1Q04175 944 aaKnown RBP12.3□□□□□ -0.44
TCD2YKL027W LEA1Q08963 238 aaPredicted RBP12.3□□□□□ -0.44
TCD2YKL027W ADE3P07245 946 aaKnown RBP12.29□□□□□ -0.44
TCD2YKL027W MAS1P10507 462 aa12.29□□□□□ -0.44
TCD2YKL027W PGS1P25578 521 aa12.29□□□□□ -0.44
TCD2YKL027W SYN8P31377 255 aa12.29□□□□□ -0.44
TCD2YKL027W HIS2P38635 335 aa12.29□□□□□ -0.44
TCD2YKL027W APM2P38700 605 aa12.29□□□□□ -0.44
TCD2YKL027W RPT2P40327 437 aaKnown RBP12.29□□□□□ -0.44
TCD2YKL027W SNZ3P43545 298 aa12.29□□□□□ -0.44
TCD2YKL027W VPS25P47142 202 aa12.29□□□□□ -0.44
TCD2YKL027W SNZ2P53824 298 aa12.29□□□□□ -0.44
TCD2YKL027W BOP3P53958 396 aa12.29□□□□□ -0.44
TCD2YKL027W ATG16Q03818 150 aa12.29□□□□□ -0.44
TCD2YKL027W PRM6Q04705 352 aa12.29□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms