RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C TY1B-JR1P47098 1755 aa4.33□□□□□ -1.72
ATG27YJL178C TY1B-ML2Q03434 1755 aaKnown RBP4.33□□□□□ -1.72
ATG27YJL178C TY1B-ER1Q03612 1755 aa4.33□□□□□ -1.72
ATG27YJL178C TY1B-ML1Q04711 1755 aaKnown RBP4.33□□□□□ -1.72
ATG27YJL178C TY1B-GR2Q12269 1755 aa4.33□□□□□ -1.72
ATG27YJL178C TY1B-OLQ12273 1755 aa4.33□□□□□ -1.72
ATG27YJL178C TY1B-PLQ12414 1755 aaKnown RBP4.33□□□□□ -1.72
ATG27YJL178C SMC4Q12267 1418 aa4.33□□□□□ -1.72
ATG27YJL178C PPS1P38148 807 aa4.33□□□□□ -1.72
ATG27YJL178C DOT6P40059 670 aaKnown RBP4.33□□□□□ -1.72
ATG27YJL178C DAS1P47005 663 aa4.33□□□□□ -1.72
ATG27YJL178C SDA1P53313 767 aaKnown RBP4.33□□□□□ -1.72
ATG27YJL178C DOS2P54858 310 aa4.33□□□□□ -1.72
ATG27YJL178C TMN2Q04562 672 aa4.33□□□□□ -1.72
ATG27YJL178C RPN7Q06103 429 aaKnown RBP4.33□□□□□ -1.72
ATG27YJL178C TGL5Q12043 749 aa4.33□□□□□ -1.72
ATG27YJL178C ACF2Q12168 779 aa4.33□□□□□ -1.72
ATG27YJL178C CCR4P31384 837 aaKnown RBP4.32□□□□□ -1.72
ATG27YJL178C MIP6P38760 659 aaKnown RBP4.32□□□□□ -1.72
ATG27YJL178C MGS1P40151 587 aa4.32□□□□□ -1.72
ATG27YJL178C YJL163CP46996 555 aa4.32□□□□□ -1.72
ATG27YJL178C ORC4P54791 529 aa4.32□□□□□ -1.72
ATG27YJL178C GAD1Q04792 585 aa4.32□□□□□ -1.72
ATG27YJL178C GUD1Q07729 489 aa4.32□□□□□ -1.72
ATG27YJL178C MYO4P32492 1471 aa4.31□□□□□ -1.72
ATG27YJL178C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
ATG27YJL178C YKR018CP36114 725 aa4.31□□□□□ -1.72
ATG27YJL178C CRP1P38845 465 aaKnown RBP4.31□□□□□ -1.72
ATG27YJL178C PRP31P49704 494 aaPredicted RBP4.31□□□□□ -1.72
ATG27YJL178C YNR029CP53729 429 aaKnown RBP4.31□□□□□ -1.72
ATG27YJL178C ARP4P80428 489 aa4.31□□□□□ -1.72
ATG27YJL178C LEE1Q02799 301 aaKnown RBP4.31□□□□□ -1.72
ATG27YJL178C MCM21Q06675 368 aa4.31□□□□□ -1.72
ATG27YJL178C THI73Q07904 523 aa4.31□□□□□ -1.72
ATG27YJL178C MCH5Q08777 521 aa4.31□□□□□ -1.72
ATG27YJL178C APL2P36000 726 aaPredicted RBP4.3□□□□□ -1.72
ATG27YJL178C MNN4P36044 1178 aa4.3□□□□□ -1.72
ATG27YJL178C APT2P36973 181 aa4.3□□□□□ -1.72
ATG27YJL178C YHL017WP38745 532 aa4.3□□□□□ -1.72
ATG27YJL178C BAP3P41815 604 aa4.3□□□□□ -1.72
ATG27YJL178C UBA2P52488 636 aa4.3□□□□□ -1.72
ATG27YJL178C TEX1P53851 422 aaKnown RBP4.3□□□□□ -1.72
ATG27YJL178C HBT1Q07653 1046 aaKnown RBP4.3□□□□□ -1.72
ATG27YJL178C SNQ2P32568 1501 aaKnown RBP4.3□□□□□ -1.72
ATG27YJL178C HOS4P40480 1083 aa4.29□□□□□ -1.72
ATG27YJL178C YJR096WP47137 282 aa4.29□□□□□ -1.72
ATG27YJL178C PCL10P53124 433 aa4.29□□□□□ -1.72
ATG27YJL178C RIA1P53893 1110 aa4.29□□□□□ -1.72
ATG27YJL178C ARG5,6Q01217 863 aa4.29□□□□□ -1.72
ATG27YJL178C ADE2P21264 571 aaKnown RBP4.28□□□□□ -1.72
ATG27YJL178C TRZ1P36159 838 aaPredicted RBP4.28□□□□□ -1.72
ATG27YJL178C TYS1P36421 394 aaKnown RBP4.28□□□□□ -1.72
ATG27YJL178C FMP52P40008 231 aa4.28□□□□□ -1.72
ATG27YJL178C BRE5P53741 515 aaKnown RBP4.28□□□□□ -1.72
ATG27YJL178C IRC13Q08630 104 aa4.28□□□□□ -1.72
ATG27YJL178C CDC25P04821 1589 aa4.27□□□□□ -1.73
ATG27YJL178C NUP145P49687 1317 aa4.27□□□□□ -1.73
ATG27YJL178C MLP2P40457 1679 aa4.27□□□□□ -1.73
ATG27YJL178C ESC1Q03661 1658 aaKnown RBP4.27□□□□□ -1.73
ATG27YJL178C PRP19P32523 503 aaKnown RBP4.27□□□□□ -1.73
ATG27YJL178C MTH1P35198 433 aa4.27□□□□□ -1.73
ATG27YJL178C YHR112CP38716 378 aa4.27□□□□□ -1.73
ATG27YJL178C BCD1P38772 366 aa4.27□□□□□ -1.73
ATG27YJL178C CCT3P39077 534 aaKnown RBP4.27□□□□□ -1.73
ATG27YJL178C GID8P40208 455 aa4.27□□□□□ -1.73
ATG27YJL178C UBC11P52492 156 aa4.27□□□□□ -1.73
ATG27YJL178C GPG1P53130 126 aa4.27□□□□□ -1.73
ATG27YJL178C YAP1802P53309 568 aa4.27□□□□□ -1.73
ATG27YJL178C GND2P53319 492 aa4.27□□□□□ -1.73
ATG27YJL178C REC102Q02721 264 aa4.27□□□□□ -1.73
ATG27YJL178C MTQ2Q03920 221 aaPredicted RBP4.27□□□□□ -1.73
ATG27YJL178C CTK1Q03957 528 aaKnown RBP4.27□□□□□ -1.73
ATG27YJL178C SGO1Q08490 590 aa4.27□□□□□ -1.73
ATG27YJL178C DCS2Q12123 353 aa4.27□□□□□ -1.73
ATG27YJL178C ULS1Q08562 1619 aa4.27□□□□□ -1.73
ATG27YJL178C TRM732Q03496 1420 aa4.27□□□□□ -1.73
ATG27YJL178C PDR15Q04182 1529 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C ERG6P25087 383 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C REV7P38927 245 aa4.26□□□□□ -1.73
ATG27YJL178C CKB2P38930 258 aa4.26□□□□□ -1.73
ATG27YJL178C QRI1P43123 477 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C STU2P46675 888 aa4.26□□□□□ -1.73
ATG27YJL178C TEL2P53038 688 aa4.26□□□□□ -1.73
ATG27YJL178C UME1Q03010 460 aa4.26□□□□□ -1.73
ATG27YJL178C HMO1Q03973 246 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C TY1B-JR2P47100 1755 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C TY1B-ER2Q03619 1755 aa4.26□□□□□ -1.73
ATG27YJL178C TY1B-MR1Q04214 1755 aa4.26□□□□□ -1.73
ATG27YJL178C TY1B-MR2Q04670 1755 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C TY1B-LR1Q12088 1755 aaKnown RBP4.26□□□□□ -1.73
ATG27YJL178C TY1B-NL1Q12112 1755 aa4.26□□□□□ -1.73
ATG27YJL178C TY1B-GR1Q12141 1755 aa4.26□□□□□ -1.73
ATG27YJL178C TY1B-BLQ12490 1755 aa4.26□□□□□ -1.73
ATG27YJL178C SPP41P38904 1435 aa4.26□□□□□ -1.73
ATG27YJL178C STH1P32597 1359 aa4.26□□□□□ -1.73
ATG27YJL178C HIS7P33734 552 aaKnown RBP4.25□□□□□ -1.73
ATG27YJL178C UBP12P39538 1254 aa4.25□□□□□ -1.73
ATG27YJL178C SDS3P40505 327 aa4.25□□□□□ -1.73
ATG27YJL178C PMT3P47190 753 aa4.25□□□□□ -1.73
ATG27YJL178C IRC10Q08118 586 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms